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  5. Pp3c3_12530V3.1

Pp3c3_12530V3.1


Description : ribulose bisphosphate carboxylase small chain 1A


Gene families : OG_01_0000042 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_12530V3.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g06020.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g15080.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_15980V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08256.1 No alias "small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!