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  5. Pp3c3_13220V3.1

Pp3c3_13220V3.1


Description : non-photochemical quenching 1


Gene families : OG_01_0004713 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_13220V3.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G08550 No alias non-photochemical quenching 1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g15960.1 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02103.1 No alias violaxanthin de-epoxidase (VDE) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02103.2 No alias violaxanthin de-epoxidase (VDE) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02103.3 No alias violaxanthin de-epoxidase (VDE) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043624 cellular protein complex disassembly IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!