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  5. Pp3c3_17260V3.1

Pp3c3_17260V3.1


Description : Rubisco methyltransferase family protein


Gene families : OG_01_0007036 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_17260V3.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G14030 No alias Rubisco methyltransferase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g661350 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22860.1 No alias lysine N-methyltransferase involved in RuBisCo regulation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12586.1 No alias lysine N-methyltransferase involved in RuBisCo regulation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043624 cellular protein complex disassembly IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!