- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : No annotation
Gene families : OG_01_0000471 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000471_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c3_20060V3.1 | |
| Cluster | HCCA: Cluster_42 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp3c12_21180V3.1 | No alias | No annotation | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c13_13800V3.1 | No alias | PIF1 helicase | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c13_15770V3.1 | No alias | PIF1 helicase | 0.1 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c14_26730V3.1 | No alias | No annotation | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c15_9490V3.1 | No alias | PIF1 helicase | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c15_9500V3.1 | No alias | No annotation | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c17_17890V3.1 | No alias | No annotation | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c17_18590V3.1 | No alias | No annotation | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c17_18610V3.1 | No alias | PIF1 helicase | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c17_6950V3.1 | No alias | No annotation | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c18_20670V3.1 | No alias | No annotation | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c1_42690V3.1 | No alias | No annotation | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c22_19090V3.1 | No alias | No annotation | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | HCCA |
| BP | GO:0006098 | pentose-phosphate shunt | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006351 | transcription, DNA-templated | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006739 | NADP metabolic process | IEP | HCCA |
| BP | GO:0006740 | NADPH regeneration | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |