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  5. Pp3c3_30280V3.1

Pp3c3_30280V3.1


Description : SITE-1 protease


Gene families : OG_01_0005972 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_30280V3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT5G19660 No alias SITE-1 protease 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g628800 No alias Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g07990.1 No alias site-1 protease. protease (SBT6.1) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!