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  5. Pp3c3_34840V3.1

Pp3c3_34840V3.1


Description : Ribosomal RNA adenine dimethylase family protein


Gene families : OG_01_0006915 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_34840V3.1
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
Cre01.g042900 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g10100.1 No alias rRNA adenosine dimethylase (DIM1A) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01619.1 No alias rRNA adenosine dimethylase (DIM1A) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!