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Description : Low temperature and salt responsive protein family
Gene families : OG_01_0000196 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000196_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G24040 | |
| Cluster | HCCA: Cluster_222 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Mp2g15060.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c19_16280V3.1 | No alias | Low temperature and salt responsive protein family | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c22_14960V3.1 | No alias | Low temperature and salt responsive protein family | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c7_16750V3.1 | No alias | Low temperature and salt responsive protein family | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| BP | GO:0009409 | response to cold | ISS | Interproscan |
| BP | GO:0042538 | hyperosmotic salinity response | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003993 | acid phosphatase activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | HCCA |
| CC | GO:0005770 | late endosome | IEP | HCCA |
| CC | GO:0005773 | vacuole | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | HCCA |
| BP | GO:0006825 | copper ion transport | IEP | HCCA |
| CC | GO:0009505 | plant-type cell wall | IEP | HCCA |
| BP | GO:0010162 | seed dormancy process | IEP | HCCA |
| MF | GO:0015089 | high-affinity copper ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015680 | protein maturation by copper ion transfer | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| BP | GO:0022611 | dormancy process | IEP | HCCA |
| MF | GO:0042030 | ATPase inhibitor activity | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0048609 | multicellular organismal reproductive process | IEP | HCCA |
| BP | GO:0055062 | phosphate ion homeostasis | IEP | HCCA |
| BP | GO:0055081 | anion homeostasis | IEP | HCCA |
| BP | GO:0072506 | trivalent inorganic anion homeostasis | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| BP | GO:1900055 | regulation of leaf senescence | IEP | HCCA |
| BP | GO:1900057 | positive regulation of leaf senescence | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000612 | PMP3 | 8 | 56 |
| PLAZA 3.0 Dicots | AT2G24040 |