1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c4_1180V3.1

Pp3c4_1180V3.1


Description : lycopene cyclase


Gene families : OG_01_0004603 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004603_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_1180V3.1
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358538 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g06410.1 No alias lycopene beta cyclase (LCY-b) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!