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  5. Pp3c4_22010V3.1

Pp3c4_22010V3.1


Description : Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain


Gene families : OG_01_0003129 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_22010V3.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT5G35910 No alias Polynucleotidyl transferase, ribonuclease H fold protein... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g512250 No alias RNA processing.RNA decay.exosome complex.associated... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g12880.1 No alias exoribonuclease (RRP6L) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06982.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!