AT2G24880

Description : Plant self-incompatibility protein S1 family

Gene families : OG_01_0000255 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G24880
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AT2G06090	No alias	Plant self-incompatibility protein S1 family	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G23142	No alias	Plant self-incompatibility protein S1 family	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G24060	No alias	Plant self-incompatibility protein S1 family	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G29037	No alias	No description available	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G04047	No alias	Plant self-incompatibility protein S1 family	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G04350	No alias	Plant self-incompatibility protein S1 family	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G27238	No alias	Plant self-incompatibility protein S1 family	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006349	regulation of gene expression by genetic imprinting	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009299	mRNA transcription	IEP	HCCA
CC	GO:0031350	intrinsic component of plastid membrane	IEP	HCCA
CC	GO:0031351	integral component of plastid membrane	IEP	HCCA
BP	GO:0071514	genetic imprinting	IEP	HCCA
BP	GO:2000014	regulation of endosperm development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010264	Self-incomp_S1	25	97

External Links

PLAZA 3.0 Dicots	AT2G24880