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  5. Pp3c4_24920V3.1

Pp3c4_24920V3.1


Description : RNA polymerase II large subunit


Gene families : OG_01_0000472 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_24920V3.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Pp3c15_18840V3.1 No alias No annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_28V3.1 No alias No annotation 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_36V3.1 No alias No annotation 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_15180V3.1 No alias No annotation 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_17830V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_29360V3.1 No alias No annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_29680V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_1840V3.1 No alias No annotation 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006313 transposition, DNA-mediated IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032196 transposition IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!