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AT2G25360


Description : RING/U-box superfamily protein


Gene families : OG_01_0000252 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G25360
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT2G16520 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G25370 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45460 No alias IBR domain containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45470 No alias IBR domain containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45480 No alias RING/U-box protein with C6HC-type zinc finger 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45540 No alias RING/U-box protein with C6HC-type zinc finger 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45560 No alias zinc finger (C3HC4-type RING finger) family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45570 No alias RING/U-box protein with C6HC-type zinc finger domain 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007163 establishment or maintenance of cell polarity IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
MF GO:0015296 anion:cation symporter activity IEP HCCA
MF GO:0015377 cation:chloride symporter activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0030010 establishment of cell polarity IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0090451 cotyledon boundary formation IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
BP GO:2000008 regulation of protein localization to cell surface IEP HCCA
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 1 78
IPR002867 IBR_dom 159 224
IPR002867 IBR_dom 238 292
IPR018957 Znf_C3HC4_RING-type 90 124
PLAZA 3.0 Dicots AT2G25360