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  5. Pp3c5_17090V3.1

Pp3c5_17090V3.1


Description : HEAT repeat ;HECT-domain (ubiquitin-transferase)


Gene families : OG_01_0004832 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_17090V3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT4G38600 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g24750.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!