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Description : LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Gene families : OG_01_0016871 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G09520 | |
| Cluster | HCCA: Cluster_76 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000278 | mitotic cell cycle | IEP | HCCA |
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| CC | GO:0000932 | P-body | IEP | HCCA |
| MF | GO:0000976 | transcription cis-regulatory region binding | IEP | HCCA |
| MF | GO:0000987 | cis-regulatory region sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | HCCA |
| BP | GO:0001709 | cell fate determination | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0003997 | acyl-CoA oxidase activity | IEP | HCCA |
| MF | GO:0004551 | nucleotide diphosphatase activity | IEP | HCCA |
| MF | GO:0004605 | phosphatidate cytidylyltransferase activity | IEP | HCCA |
| MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | HCCA |
| MF | GO:0005354 | galactose transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005539 | glycosaminoglycan binding | IEP | HCCA |
| CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | HCCA |
| BP | GO:0006446 | regulation of translational initiation | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006839 | mitochondrial transport | IEP | HCCA |
| BP | GO:0006855 | xenobiotic transmembrane transport | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0007049 | cell cycle | IEP | HCCA |
| MF | GO:0008327 | methyl-CpG binding | IEP | HCCA |
| BP | GO:0009560 | embryo sac egg cell differentiation | IEP | HCCA |
| BP | GO:0010090 | trichome morphogenesis | IEP | HCCA |
| CC | GO:0010369 | chromocenter | IEP | HCCA |
| MF | GO:0015145 | monosaccharide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015149 | hexose transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016778 | diphosphotransferase activity | IEP | HCCA |
| MF | GO:0016819 | hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides | IEP | HCCA |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| MF | GO:0017151 | DEAD/H-box RNA helicase binding | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0030145 | manganese ion binding | IEP | HCCA |
| BP | GO:0031087 | deadenylation-independent decapping of nuclear-transcribed mRNA | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| MF | GO:0035064 | methylated histone binding | IEP | HCCA |
| CC | GO:0035770 | ribonucleoprotein granule | IEP | HCCA |
| CC | GO:0036464 | cytoplasmic ribonucleoprotein granule | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| MF | GO:0042834 | peptidoglycan binding | IEP | HCCA |
| BP | GO:0042908 | xenobiotic transport | IEP | HCCA |
| MF | GO:0043530 | adenosine 5'-monophosphoramidase activity | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0047627 | adenylylsulfatase activity | IEP | HCCA |
| MF | GO:0047710 | bis(5'-adenosyl)-triphosphatase activity | IEP | HCCA |
| MF | GO:0050072 | m7G(5')pppN diphosphatase activity | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| BP | GO:0051445 | regulation of meiotic cell cycle | IEP | HCCA |
| BP | GO:0051446 | positive regulation of meiotic cell cycle | IEP | HCCA |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | HCCA |
| MF | GO:0080025 | phosphatidylinositol-3,5-bisphosphate binding | IEP | HCCA |
| BP | GO:0110154 | RNA decapping | IEP | HCCA |
| BP | GO:0110156 | methylguanosine-cap decapping | IEP | HCCA |
| MF | GO:0140030 | modification-dependent protein binding | IEP | HCCA |
| MF | GO:0140034 | methylation-dependent protein binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1900055 | regulation of leaf senescence | IEP | HCCA |
| BP | GO:1900056 | negative regulation of leaf senescence | IEP | HCCA |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
| MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | HCCA |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT1G09520 |