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  5. Pp3c5_6540V3.1

Pp3c5_6540V3.1


Description : transcription regulators


Gene families : OG_01_0002478 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_6540V3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT1G02080 No alias transcription regulators 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g632950 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g11860.1 No alias component NOT1 of mRNA deadenylation CCR4-NOT complex 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09339.2 No alias scaffold component NOT1 of mRNA deadenylation CCR4-NOT complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0140352 export from cell IEP HCCA

No InterPro domains available for this sequence

No external refs found!