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  5. Pp3c6_1140V3.1

Pp3c6_1140V3.1


Description : Ribosomal L28 family


Gene families : OG_01_0005251 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_1140V3.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT2G33450 No alias Ribosomal L28 family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265800 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g05120.1 No alias component psRPL28 of large ribosomal subunit proteome 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_28500V3.1 No alias Ribosomal L28 family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR026569 Ribo_L28/L24 54 112
No external refs found!