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  5. Pp3c6_25940V3.1

Pp3c6_25940V3.1


Description : glycosyl hydrolase 9C2


Gene families : OG_01_0000030 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_25940V3.1
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AT1G48930 No alias glycosyl hydrolase 9C1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G65610 No alias Six-hairpin glycosidases superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G32990 No alias glycosyl hydrolase 9B8 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G39000 No alias glycosyl hydrolase 9B17 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g26250.1 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g17860.1 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_27980V3.1 No alias glycosyl hydrolase 9A1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_23640V3.1 No alias glycosyl hydrolase 9B7 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_9540V3.1 No alias glycosyl hydrolase 9A1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!