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  5. Pp3c6_8810V3.1

Pp3c6_8810V3.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0001952 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_8810V3.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT5G16280 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre01.g024400 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g07480.1 No alias component TRS85 of TRAPP-III complex-specific components 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13268.3 No alias component TRS85 of TRAPP-III complex-specific components 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!