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  5. Pp3c7_14180V3.1

Pp3c7_14180V3.1


Description : SEC7-like guanine nucleotide exchange family protein


Gene families : OG_01_0003288 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_14180V3.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT1G01960 No alias SEC7-like guanine nucleotide exchange family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g390319 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.17 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04867.1 No alias ARF-GTPase guanyl-nucleotide exchange factor (BIG) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!