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  5. AT2G28460

AT2G28460


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG_01_0000059 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28460
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AT1G34480 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G44020 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G44050 No alias Cysteine/Histidine-rich C1 domain family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61710 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02620 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02640 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02690 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13950 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G50010 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10560 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G03355 No alias No description available 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G55780 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
MF GO:0002020 protease binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008559 ABC-type xenobiotic transporter activity IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009833 plant-type primary cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
MF GO:0009931 calcium-dependent protein serine/threonine kinase activity IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0010065 primary meristem tissue development IEP HCCA
BP GO:0010067 procambium histogenesis IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
MF GO:0010328 auxin influx transmembrane transporter activity IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
CC GO:0010330 cellulose synthase complex IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0010857 calcium-dependent protein kinase activity IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015802 basic amino acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044070 regulation of anion transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048508 embryonic meristem development IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0060919 auxin influx IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902456 regulation of stomatal opening IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1903959 regulation of anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 283 327
IPR004146 DC1 337 384
IPR004146 DC1 225 271
IPR004146 DC1 421 471
IPR004146 DC1 480 532
IPR004146 DC1 592 639
IPR004146 DC1 542 583
PLAZA 3.0 Dicots AT2G28460