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  5. Pp3c7_15320V3.1

Pp3c7_15320V3.1


Description : Lycopene beta/epsilon cyclase protein


Gene families : OG_01_0004430 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_15320V3.1
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AT5G57030 No alias Lycopene beta/epsilon cyclase protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g267600 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g05820.1 No alias lycopene epsilon cyclase (LCY-e) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12915.1 No alias no annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP HCCA
MF GO:0005244 voltage-gated ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated anion channel activity IEP HCCA
MF GO:0008509 anion transmembrane transporter activity IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!