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AT2G28680


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0012252 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28680
Cluster HCCA: Cluster_167


Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0045735 nutrient reservoir activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 196 338
IPR006045 Cupin_1 9 157
PLAZA 3.0 Dicots AT2G28680