1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c7_20890V3.1

Pp3c7_20890V3.1


Description : pre-mRNA-processing protein 40C


Gene families : OG_01_0004686 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004686_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_20890V3.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT3G19840 No alias pre-mRNA-processing protein 40C 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g09830.1 No alias pre-mRNA-processing protein (PRP40C) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04671.1 No alias pre-mRNA-processing protein (PRP40C) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!