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  5. Pp3c7_23840V3.1

Pp3c7_23840V3.1


Description : RNA-processing, Lsm domain


Gene families : OG_01_0004576 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004576_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_23840V3.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AT1G24050 No alias RNA-processing, Lsm domain 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g421850 No alias No description available 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22920.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!