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  5. AT2G29020

AT2G29020


Description : Rab5-interacting family protein


Gene families : OG_01_0004252 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G29020
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Mp6g20010.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005244 voltage-gated ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005731 nucleolus organizer region IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007584 response to nutrient IEP HCCA
CC GO:0008076 voltage-gated potassium channel complex IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
CC GO:0010370 perinucleolar chromocenter IEP HCCA
BP GO:0010417 glucuronoxylan biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022843 voltage-gated cation channel activity IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
CC GO:0030874 nucleolar chromatin IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031670 cellular response to nutrient IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0034702 ion channel complex IEP HCCA
CC GO:0034703 cation channel complex IEP HCCA
CC GO:0034705 potassium channel complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
CC GO:0043224 nuclear SCF ubiquitin ligase complex IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045013 carbon catabolite repression of transcription IEP HCCA
BP GO:0045014 carbon catabolite repression of transcription by glucose IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045990 carbon catabolite regulation of transcription IEP HCCA
BP GO:0046015 regulation of transcription by glucose IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0061984 catabolite repression IEP HCCA
BP GO:0061985 carbon catabolite repression IEP HCCA
BP GO:0061986 negative regulation of transcription by glucose IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR029008 Rab5IP_fam 49 128
PLAZA 3.0 Dicots AT2G29020