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  5. Pp3c7_4990V3.1

Pp3c7_4990V3.1


Description : DNA-directed RNA polymerase family protein


Gene families : OG_01_0007921 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007921_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_4990V3.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
ATCG00170 No alias DNA-directed RNA polymerase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g00060.1 No alias RpoC2 core component plastid-encoded RNA polymerase 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR007081 RNA_pol_Rpb1_5 17 106
No external refs found!