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  5. Pp3c7_5450V3.1

Pp3c7_5450V3.1


Description : photosystem II reaction center PSB28 protein


Gene families : OG_01_0005136 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_5450V3.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT4G28660 No alias photosystem II reaction center PSB28 protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g440450 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g14630.1 No alias Psb28 protein involved in PS-II assembly 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_05948.1 No alias protein involved in PS-II assembly (Psb28) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP HCCA
BP GO:0015986 ATP synthesis coupled proton transport IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!