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  5. Pp3c8_13470V3.1

Pp3c8_13470V3.1


Description : expansin A1


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_13470V3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Mp3g09760.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_18030V3.1 No alias expansin A14 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_19720V3.1 No alias expansin A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_16280V3.1 No alias expansin A14 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA

No InterPro domains available for this sequence

No external refs found!