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  5. Pp3c8_14940V3.1

Pp3c8_14940V3.1


Description : SIN3-like 4


Gene families : OG_01_0000605 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_14940V3.1
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AT1G24190 No alias SIN3-like 3 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G70060 No alias SIN3-like 4 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G01320 No alias SIN3-like 1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15020 No alias SIN3-like 2 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g02880.1 No alias component SNL of histone deacetylase machineries 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_19010V3.1 No alias SIN3-like 4 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription, initiation IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!