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Description : RING/U-box superfamily protein
Gene families : OG_01_0002010 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002010_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G29840 | |
| Cluster | HCCA: Cluster_74 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G18760 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G74620 | No alias | RING/U-box superfamily protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G13228 | No alias | RING/U-box superfamily protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G53910 | No alias | RING/U-box superfamily protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003993 | acid phosphatase activity | IEP | HCCA |
| MF | GO:0004708 | MAP kinase kinase activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| MF | GO:0004722 | protein serine/threonine phosphatase activity | IEP | HCCA |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005351 | carbohydrate:proton symporter activity | IEP | HCCA |
| MF | GO:0005402 | carbohydrate:cation symporter activity | IEP | HCCA |
| BP | GO:0006071 | glycerol metabolic process | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| MF | GO:0008420 | RNA polymerase II CTD heptapeptide repeat phosphatase activity | IEP | HCCA |
| MF | GO:0008889 | glycerophosphodiester phosphodiesterase activity | IEP | HCCA |
| MF | GO:0015114 | phosphate ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015145 | monosaccharide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015293 | symporter activity | IEP | HCCA |
| MF | GO:0015294 | solute:cation symporter activity | IEP | HCCA |
| MF | GO:0015295 | solute:proton symporter activity | IEP | HCCA |
| BP | GO:0015749 | monosaccharide transmembrane transport | IEP | HCCA |
| BP | GO:0015858 | nucleoside transport | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| BP | GO:0018126 | protein hydroxylation | IEP | HCCA |
| BP | GO:0018401 | peptidyl-proline hydroxylation to 4-hydroxy-L-proline | IEP | HCCA |
| BP | GO:0019400 | alditol metabolic process | IEP | HCCA |
| BP | GO:0019511 | peptidyl-proline hydroxylation | IEP | HCCA |
| CC | GO:0022625 | cytosolic large ribosomal subunit | IEP | HCCA |
| BP | GO:0034219 | carbohydrate transmembrane transport | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0070940 | dephosphorylation of RNA polymerase II C-terminal domain | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 243 | 285 |
| PLAZA 3.0 Dicots | AT2G29840 |