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  5. Pp3c8_1610V3.1

Pp3c8_1610V3.1


Description : Ribosomal protein L1p/L10e family


Gene families : OG_01_0002429 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_1610V3.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT1G06380 No alias Ribosomal protein L1p/L10e family 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42650 No alias Ribosomal protein L1p/L10e family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58660 No alias Ribosomal protein L1p/L10e family 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre07.g314100 No alias No description available 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 43 253
No external refs found!