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  5. Pp3c8_870V3.1

Pp3c8_870V3.1


Description : expansin A1


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_870V3.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT2G28950 No alias expansin A6 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G37640 No alias Barwin-like endoglucanases superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G15370 No alias expansin 12 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22700.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22730.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g26350.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g18600.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g24470.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g01930.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g18860.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_12000V3.1 No alias expansin A14 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_20360V3.1 No alias expansin A9 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_18030V3.1 No alias expansin A14 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_19720V3.1 No alias expansin A1 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_5780V3.1 No alias expansin A15 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_760V3.1 No alias expansin A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_9260V3.1 No alias expansin A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_12870V3.1 No alias expansin A14 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_13450V3.1 No alias expansin A1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!