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  5. Pp3c9_24890V3.1

Pp3c9_24890V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0006933 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_24890V3.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT1G65030 No alias Transducin/WD40 repeat-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g205800 No alias No description available 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g21630.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!