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  5. Pp3c9_4700V3.1

Pp3c9_4700V3.1


Description : proteolysis 6


Gene families : OG_01_0001438 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_4700V3.1
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Pp3c15_3560V3.1 No alias proteolysis 6 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_29090V3.1 No alias proteolysis 6 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03781.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03781.2 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03781.3 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!