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  5. Pp3s124_80V3.1

Pp3s124_80V3.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0000433 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000433_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3s124_80V3.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_220V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_26910V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_300V3.1 No alias CCCH-type zinc finger family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_20630V3.1 No alias CCCH-type zinc finger family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_23020V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_43090V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_80V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006313 transposition, DNA-mediated IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0032196 transposition IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!