1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3s93_30V3.1

Pp3s93_30V3.1


Description : eukaryotic translation initiation factor 4A1


Gene families : OG_01_0002662 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002662_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3s93_30V3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AT1G54270 No alias eif4a-2 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g298650 No alias Protein biosynthesis.translation initiation.mRNA... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g02760.1 No alias mRNA unwinding factor (eIF4A) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_28210V3.1 No alias eukaryotic translation initiation factor 4A1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_1080V3.1 No alias eukaryotic translation initiation factor 4A1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 65 226
IPR001650 Helicase_C 266 374
No external refs found!