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  5. Zci_00641.1

Zci_00641.1


Description : assembly factor CcsB of CCS cytochrome f/c6 maturation system (system II)


Gene families : OG_01_0006650 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_00641.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Pp3c5_6360V3.1 No alias cytochrome c biogenesis protein family 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR007816 ResB-like_domain 534 646
IPR007816 ResB-like_domain 197 491
No external refs found!