1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G33200

AT2G33200


Description : F-box family protein


Gene families : OG_01_0000101 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G33200
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G10110 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G27580 No alias Protein of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G03560 No alias F-box family protein with a domain of unknown function (DUF295) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G03610 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04810 No alias Protein of unknown function (DUF295) 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04830 No alias Protein of unknown function (DUF295) 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04840 No alias Protein of unknown function (DUF295) 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05970 No alias F-box family protein with a domain of unknown function (DUF295) 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G14500 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10820 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22060 No alias F-box family protein with a domain of unknown function (DUF295) 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22165 No alias F-box family protein with a domain of unknown function (DUF295) 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22170 No alias F-box family protein with a domain of unknown function (DUF295) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38270 No alias F-box family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G66830 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
MF GO:0005402 carbohydrate:cation symporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
BP GO:0015749 monosaccharide transmembrane transport IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 8 46
IPR005174 DUF295 288 350
PLAZA 3.0 Dicots AT2G33200