1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_01575.1

Zci_01575.1


Description : no annotation


Gene families : OG_01_0000030 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_01575.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G22880 No alias cellulase 5 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G65610 No alias Six-hairpin glycosidases superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G44560 No alias glycosyl hydrolase 9B11 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G43860 No alias glycosyl hydrolase 9A4 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g273100 No alias No description available 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g730600 No alias Endoglucanase 18 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03857.1 No alias no annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03866.1 No alias no annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
MF GO:0097573 glutathione oxidoreductase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR019028 CBM_49 876 956
IPR019028 CBM_49 760 842
IPR001701 Glyco_hydro_9 37 525
No external refs found!