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AT1G10240


Description : FAR1-related sequence 11


Gene families : OG_01_0000492 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G10240
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT4G19990 No alias FAR1-related sequence 1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009639 response to red or far red light ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
MF GO:0000149 SNARE binding IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000712 resolution of meiotic recombination intermediates IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0000795 synaptonemal complex IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
CC GO:0000811 GINS complex IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0002832 negative regulation of response to biotic stimulus IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004725 protein tyrosine phosphatase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005712 chiasma IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
BP GO:0006089 lactate metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006268 DNA unwinding involved in DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006471 protein ADP-ribosylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007112 male meiosis cytokinesis IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0007349 cellularization IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009438 methylglyoxal metabolic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009558 embryo sac cellularization IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0010113 negative regulation of systemic acquired resistance IEP HCCA
BP GO:0010196 nonphotochemical quenching IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010245 radial microtubular system formation IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010364 regulation of ethylene biosynthetic process IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
BP GO:0010452 histone H3-K36 methylation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
MF GO:0010485 H4 histone acetyltransferase activity IEP HCCA
BP GO:0010500 transmitting tissue development IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone-lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
MF GO:0030946 protein tyrosine phosphatase activity, metal-dependent IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0031335 regulation of sulfur amino acid metabolic process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0032102 negative regulation of response to external stimulus IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032390 MutLbeta complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033206 meiotic cytokinesis IEP HCCA
MF GO:0033984 indole-3-glycerol-phosphate lyase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0042182 ketone catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046185 aldehyde catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046976 histone methyltransferase activity (H3-K27 specific) IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
BP GO:0051596 methylglyoxal catabolic process IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0055070 copper ion homeostasis IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0061727 methylglyoxal catabolic process to lactate IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070734 histone H3-K27 methylation IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
BP GO:1900908 regulation of olefin metabolic process IEP HCCA
BP GO:1900911 regulation of olefin biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:1990066 energy quenching IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 553 587
IPR004330 FAR1_DNA_bnd_dom 62 155
IPR018289 MULE_transposase_dom 278 368
PLAZA 3.0 Dicots AT1G10240