Coexpression cluster: Cluster_143 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 cellular amino acid metabolic process 10.64% (5/47) 4.44 3e-06 0.000662
GO:0006082 organic acid metabolic process 10.64% (5/47) 3.75 3.4e-05 0.001658
GO:0019752 carboxylic acid metabolic process 10.64% (5/47) 3.75 3.4e-05 0.001658
GO:0043436 oxoacid metabolic process 10.64% (5/47) 3.75 3.4e-05 0.001658
GO:0016874 ligase activity 8.51% (4/47) 4.3 5e-05 0.001977
GO:0043039 tRNA aminoacylation 6.38% (3/47) 5.01 0.00011 0.002181
GO:0004812 aminoacyl-tRNA ligase activity 6.38% (3/47) 5.01 0.00011 0.002181
GO:0016875 ligase activity, forming carbon-oxygen bonds 6.38% (3/47) 5.01 0.00011 0.002181
GO:0043038 amino acid activation 6.38% (3/47) 5.01 0.00011 0.002181
GO:0006418 tRNA aminoacylation for protein translation 6.38% (3/47) 5.16 8e-05 0.002644
GO:0140101 catalytic activity, acting on a tRNA 6.38% (3/47) 4.58 0.00027 0.004866
GO:0006399 tRNA metabolic process 6.38% (3/47) 4.4 0.000388 0.005906
GO:0044281 small molecule metabolic process 10.64% (5/47) 3.01 0.000374 0.006175
GO:0034660 ncRNA metabolic process 6.38% (3/47) 3.84 0.001207 0.017077
GO:0140640 catalytic activity, acting on a nucleic acid 8.51% (4/47) 2.94 0.001815 0.023955
GO:0004834 tryptophan synthase activity 2.13% (1/47) 8.75 0.002329 0.028826
GO:1901605 alpha-amino acid metabolic process 4.26% (2/47) 4.54 0.003358 0.036938
GO:0140098 catalytic activity, acting on RNA 6.38% (3/47) 3.34 0.003226 0.037579
GO:0042430 indole-containing compound metabolic process 2.13% (1/47) 7.75 0.004653 0.043875
GO:0006586 indolalkylamine metabolic process 2.13% (1/47) 7.75 0.004653 0.043875
GO:0006568 tryptophan metabolic process 2.13% (1/47) 7.75 0.004653 0.043875
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_79 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_98 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_148 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_183 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_221 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_38 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_16 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_61 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_74 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_108 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_138 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_1 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_69 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_132 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_133 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_163 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_193 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_273 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_300 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_44 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_62 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_212 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (47) (download table)

InterPro Domains

GO Terms

Family Terms