Coexpression cluster: Cluster_29 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009507 chloroplast 41.27% (52/126) 1.61 0.0 0.0
GO:0009536 plastid 41.27% (52/126) 1.58 0.0 0.0
GO:0005982 starch metabolic process 11.11% (14/126) 3.77 0.0 0.0
GO:0019252 starch biosynthetic process 9.52% (12/126) 3.82 0.0 0.0
GO:0044042 glucan metabolic process 11.11% (14/126) 3.04 0.0 0.0
GO:0006073 cellular glucan metabolic process 11.11% (14/126) 3.04 0.0 0.0
GO:0009250 glucan biosynthetic process 9.52% (12/126) 3.22 0.0 1e-06
GO:0007623 circadian rhythm 7.14% (9/126) 3.79 0.0 2e-06
GO:0048511 rhythmic process 7.14% (9/126) 3.79 0.0 2e-06
GO:0044264 cellular polysaccharide metabolic process 11.11% (14/126) 2.44 0.0 2.7e-05
GO:0016160 amylase activity 3.17% (4/126) 5.69 1e-06 6.9e-05
GO:0044262 cellular carbohydrate metabolic process 11.11% (14/126) 2.25 2e-06 0.000104
GO:0033692 cellular polysaccharide biosynthetic process 9.52% (12/126) 2.47 2e-06 0.000111
GO:0005976 polysaccharide metabolic process 11.11% (14/126) 2.23 2e-06 0.000119
GO:0005984 disaccharide metabolic process 6.35% (8/126) 3.19 3e-06 0.000165
GO:0034637 cellular carbohydrate biosynthetic process 9.52% (12/126) 2.37 4e-06 0.000201
GO:0060089 molecular transducer activity 4.76% (6/126) 3.81 5e-06 0.000223
GO:0044275 cellular carbohydrate catabolic process 3.17% (4/126) 5.08 6e-06 0.000244
GO:0009311 oligosaccharide metabolic process 6.35% (8/126) 3.06 6e-06 0.000256
GO:0000023 maltose metabolic process 5.56% (7/126) 3.34 6e-06 0.000263
GO:0000271 polysaccharide biosynthetic process 9.52% (12/126) 2.23 1.1e-05 0.000416
GO:0015770 sucrose transport 2.38% (3/126) 5.9 1.5e-05 0.00055
GO:0005375 copper ion transmembrane transporter activity 2.38% (3/126) 5.78 2e-05 0.000619
GO:0015772 oligosaccharide transport 2.38% (3/126) 5.78 2e-05 0.000619
GO:0015766 disaccharide transport 2.38% (3/126) 5.78 2e-05 0.000619
GO:0000156 phosphorelay response regulator activity 3.17% (4/126) 4.65 1.9e-05 0.000684
GO:0008515 sucrose transmembrane transporter activity 2.38% (3/126) 5.36 5e-05 0.001497
GO:0015154 disaccharide transmembrane transporter activity 2.38% (3/126) 5.28 6e-05 0.001578
GO:0044247 cellular polysaccharide catabolic process 2.38% (3/126) 5.28 6e-05 0.001578
GO:0005983 starch catabolic process 2.38% (3/126) 5.28 6e-05 0.001578
GO:0009251 glucan catabolic process 2.38% (3/126) 5.28 6e-05 0.001578
GO:0015157 oligosaccharide transmembrane transporter activity 2.38% (3/126) 5.12 8.5e-05 0.002163
GO:0016051 carbohydrate biosynthetic process 10.32% (13/126) 1.78 0.000109 0.002691
GO:0004645 1,4-alpha-oligoglucan phosphorylase activity 1.59% (2/126) 6.78 0.000123 0.002948
GO:0009941 chloroplast envelope 7.94% (10/126) 2.03 0.000178 0.004149
GO:0009526 plastid envelope 7.94% (10/126) 2.02 0.000192 0.004346
GO:0008643 carbohydrate transport 2.38% (3/126) 4.66 0.000222 0.004904
GO:0016021 integral component of membrane 4.76% (6/126) 2.78 0.000256 0.005493
GO:0010287 plastoglobule 3.17% (4/126) 3.69 0.000267 0.005587
GO:0031975 envelope 7.94% (10/126) 1.87 0.000446 0.008879
GO:0031967 organelle envelope 7.94% (10/126) 1.87 0.000446 0.008879
GO:0009736 cytokinin-activated signaling pathway 3.17% (4/126) 3.47 0.000474 0.009209
GO:0046352 disaccharide catabolic process 1.59% (2/126) 5.78 0.000566 0.010504
GO:0004556 alpha-amylase activity 1.59% (2/126) 5.78 0.000566 0.010504
GO:0016161 beta-amylase activity 1.59% (2/126) 5.61 0.000726 0.012605
GO:0009313 oligosaccharide catabolic process 1.59% (2/126) 5.61 0.000726 0.012605
GO:0005975 carbohydrate metabolic process 11.9% (15/126) 1.37 0.000702 0.012726
GO:0046915 transition metal ion transmembrane transporter activity 2.38% (3/126) 4.08 0.000749 0.012726
GO:0019761 glucosinolate biosynthetic process 3.97% (5/126) 2.7 0.001082 0.017304
GO:0019758 glycosinolate biosynthetic process 3.97% (5/126) 2.7 0.001082 0.017304
GO:0016144 S-glycoside biosynthetic process 3.97% (5/126) 2.7 0.001082 0.017304
GO:1901659 glycosyl compound biosynthetic process 3.97% (5/126) 2.66 0.001231 0.019318
GO:0009963 positive regulation of flavonoid biosynthetic process 3.17% (4/126) 3.09 0.001282 0.019745
GO:0000272 polysaccharide catabolic process 2.38% (3/126) 3.75 0.00146 0.022062
GO:0009532 plastid stroma 7.14% (9/126) 1.75 0.00154 0.022441
GO:0009570 chloroplast stroma 7.14% (9/126) 1.75 0.00154 0.022441
GO:0010232 vascular transport 1.59% (2/126) 4.87 0.00208 0.026941
GO:0003013 circulatory system process 1.59% (2/126) 4.87 0.00208 0.026941
GO:0003018 vascular process in circulatory system 1.59% (2/126) 4.87 0.00208 0.026941
GO:0003008 system process 1.59% (2/126) 4.87 0.00208 0.026941
GO:0010233 phloem transport 1.59% (2/126) 4.87 0.00208 0.026941
GO:0015144 carbohydrate transmembrane transporter activity 3.17% (4/126) 2.92 0.001985 0.027924
GO:0140657 ATP-dependent activity 5.56% (7/126) 2.0 0.001965 0.028133
GO:0009962 regulation of flavonoid biosynthetic process 3.17% (4/126) 2.85 0.002384 0.029039
GO:0019757 glycosinolate metabolic process 3.97% (5/126) 2.44 0.002366 0.029254
GO:0019760 glucosinolate metabolic process 3.97% (5/126) 2.44 0.002366 0.029254
GO:0016143 S-glycoside metabolic process 3.97% (5/126) 2.44 0.002366 0.029254
GO:0009059 macromolecule biosynthetic process 11.9% (15/126) 1.18 0.002614 0.031368
GO:0006825 copper ion transport 1.59% (2/126) 4.53 0.003347 0.039586
GO:0010478 chlororespiration 0.79% (1/126) 7.78 0.004556 0.045899
GO:0033494 ferulate metabolic process 0.79% (1/126) 7.78 0.004556 0.045899
GO:0008922 long-chain fatty acid [acyl-carrier-protein] ligase activity 0.79% (1/126) 7.78 0.004556 0.045899
GO:0043394 proteoglycan binding 0.79% (1/126) 7.78 0.004556 0.045899
GO:0035434 copper ion transmembrane transport 0.79% (1/126) 7.78 0.004556 0.045899
GO:0046027 phospholipid:diacylglycerol acyltransferase activity 0.79% (1/126) 7.78 0.004556 0.045899
GO:0050521 alpha-glucan, water dikinase activity 0.79% (1/126) 7.78 0.004556 0.045899
GO:0004740 pyruvate dehydrogenase (acetyl-transferring) kinase activity 0.79% (1/126) 7.78 0.004556 0.045899
GO:0006106 fumarate metabolic process 0.79% (1/126) 7.78 0.004556 0.045899
GO:0022857 transmembrane transporter activity 8.73% (11/126) 1.35 0.004141 0.047594
GO:0004176 ATP-dependent peptidase activity 1.59% (2/126) 4.39 0.004086 0.047636
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_3 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_7 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_10 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_15 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_16 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_18 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_20 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_21 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_26 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_28 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_30 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_34 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_41 0.051 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_46 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_48 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_50 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_54 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_56 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_59 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_74 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_79 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_84 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_85 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_86 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_93 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_94 0.039 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_95 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_103 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_105 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_109 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_113 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_120 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_125 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_136 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_141 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_142 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_143 0.054 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_150 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_151 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_163 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_165 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_169 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_173 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_174 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_175 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_176 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_177 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_182 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_197 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_198 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_199 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_201 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_206 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_209 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_212 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_225 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_234 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_236 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_237 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_243 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_244 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_246 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_249 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_250 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_255 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_261 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_159 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_14 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_21 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_50 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_61 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_66 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_80 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_101 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_124 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_134 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_153 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_161 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_8 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_69 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_105 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_120 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_140 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_143 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_163 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_173 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_193 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_212 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_216 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_231 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_247 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_278 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_304 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_21 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_24 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_85 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_111 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_138 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_168 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (126) (download table)

InterPro Domains

GO Terms

Family Terms