Coexpression cluster: Cluster_239 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009507 chloroplast 90.0% (54/60) 2.73 0.0 0.0
GO:0009536 plastid 90.0% (54/60) 2.71 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 33.33% (20/60) 3.94 0.0 0.0
GO:0055035 plastid thylakoid membrane 26.67% (16/60) 4.54 0.0 0.0
GO:0019637 organophosphate metabolic process 40.0% (24/60) 3.28 0.0 0.0
GO:0009535 chloroplast thylakoid membrane 26.67% (16/60) 4.55 0.0 0.0
GO:0042651 thylakoid membrane 26.67% (16/60) 4.49 0.0 0.0
GO:0034357 photosynthetic membrane 26.67% (16/60) 4.49 0.0 0.0
GO:0009579 thylakoid 26.67% (16/60) 4.5 0.0 0.0
GO:0042170 plastid membrane 26.67% (16/60) 4.22 0.0 0.0
GO:0005622 intracellular anatomical structure 26.67% (16/60) 4.09 0.0 0.0
GO:0009941 chloroplast envelope 28.33% (17/60) 3.87 0.0 0.0
GO:0009526 plastid envelope 28.33% (17/60) 3.86 0.0 0.0
GO:0006796 phosphate-containing compound metabolic process 41.67% (25/60) 2.8 0.0 0.0
GO:0006793 phosphorus metabolic process 41.67% (25/60) 2.78 0.0 0.0
GO:0006098 pentose-phosphate shunt 20.0% (12/60) 4.97 0.0 0.0
GO:0051156 glucose 6-phosphate metabolic process 20.0% (12/60) 4.93 0.0 0.0
GO:0006740 NADPH regeneration 20.0% (12/60) 4.92 0.0 0.0
GO:0006739 NADP metabolic process 20.0% (12/60) 4.89 0.0 0.0
GO:0031967 organelle envelope 28.33% (17/60) 3.7 0.0 0.0
GO:0031975 envelope 28.33% (17/60) 3.7 0.0 0.0
GO:0010218 response to far red light 15.0% (9/60) 5.39 0.0 0.0
GO:1901135 carbohydrate derivative metabolic process 31.67% (19/60) 2.99 0.0 0.0
GO:0010264 myo-inositol hexakisphosphate biosynthetic process 13.33% (8/60) 5.83 0.0 0.0
GO:0032958 inositol phosphate biosynthetic process 13.33% (8/60) 5.83 0.0 0.0
GO:0033517 myo-inositol hexakisphosphate metabolic process 13.33% (8/60) 5.83 0.0 0.0
GO:0010114 response to red light 15.0% (9/60) 5.32 0.0 0.0
GO:0046173 polyol biosynthetic process 13.33% (8/60) 5.76 0.0 0.0
GO:0090407 organophosphate biosynthetic process 26.67% (16/60) 3.32 0.0 0.0
GO:0019751 polyol metabolic process 15.0% (9/60) 5.21 0.0 0.0
GO:0009637 response to blue light 15.0% (9/60) 5.02 0.0 0.0
GO:0043647 inositol phosphate metabolic process 13.33% (8/60) 5.39 0.0 0.0
GO:0044237 cellular metabolic process 66.67% (40/60) 1.4 0.0 0.0
GO:0009534 chloroplast thylakoid 16.67% (10/60) 4.44 0.0 0.0
GO:0031976 plastid thylakoid 16.67% (10/60) 4.44 0.0 0.0
GO:0019684 photosynthesis, light reaction 15.0% (9/60) 4.81 0.0 0.0
GO:0031090 organelle membrane 28.33% (17/60) 2.89 0.0 0.0
GO:0046148 pigment biosynthetic process 16.67% (10/60) 4.26 0.0 0.0
GO:0010287 plastoglobule 11.67% (7/60) 5.57 0.0 0.0
GO:0010207 photosystem II assembly 15.0% (9/60) 4.56 0.0 0.0
GO:0008152 metabolic process 68.33% (41/60) 1.26 0.0 0.0
GO:0046165 alcohol biosynthetic process 13.33% (8/60) 4.94 0.0 0.0
GO:0006066 alcohol metabolic process 15.0% (9/60) 4.46 0.0 0.0
GO:0043227 membrane-bounded organelle 95.0% (57/60) 0.66 0.0 0.0
GO:0043231 intracellular membrane-bounded organelle 95.0% (57/60) 0.66 0.0 0.0
GO:0043226 organelle 95.0% (57/60) 0.64 0.0 0.0
GO:0042440 pigment metabolic process 16.67% (10/60) 3.93 0.0 0.0
GO:0043229 intracellular organelle 95.0% (57/60) 0.65 0.0 0.0
GO:0009773 photosynthetic electron transport in photosystem I 10.0% (6/60) 5.79 0.0 0.0
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 15.0% (9/60) 4.19 0.0 0.0
GO:0019682 glyceraldehyde-3-phosphate metabolic process 15.0% (9/60) 4.19 0.0 0.0
GO:0006546 glycine catabolic process 10.0% (6/60) 5.73 0.0 0.0
GO:0009240 isopentenyl diphosphate biosynthetic process 15.0% (9/60) 4.16 0.0 0.0
GO:0046490 isopentenyl diphosphate metabolic process 15.0% (9/60) 4.16 0.0 0.0
GO:0009071 serine family amino acid catabolic process 10.0% (6/60) 5.68 0.0 0.0
GO:0016109 tetraterpenoid biosynthetic process 11.67% (7/60) 5.0 0.0 0.0
GO:0016117 carotenoid biosynthetic process 11.67% (7/60) 5.0 0.0 0.0
GO:0006544 glycine metabolic process 10.0% (6/60) 5.58 0.0 0.0
GO:0016116 carotenoid metabolic process 11.67% (7/60) 4.93 0.0 0.0
GO:0016108 tetraterpenoid metabolic process 11.67% (7/60) 4.93 0.0 0.0
GO:0010304 PSII associated light-harvesting complex II catabolic process 8.33% (5/60) 6.36 0.0 0.0
GO:0044257 cellular protein catabolic process 8.33% (5/60) 6.31 0.0 0.0
GO:0009767 photosynthetic electron transport chain 10.0% (6/60) 5.41 0.0 0.0
GO:0009987 cellular process 73.33% (44/60) 1.01 0.0 0.0
GO:1901576 organic substance biosynthetic process 45.0% (27/60) 1.67 0.0 0.0
GO:0044283 small molecule biosynthetic process 26.67% (16/60) 2.54 0.0 0.0
GO:0071704 organic substance metabolic process 61.67% (37/60) 1.23 0.0 0.0
GO:0044281 small molecule metabolic process 36.67% (22/60) 1.95 0.0 0.0
GO:0009058 biosynthetic process 45.0% (27/60) 1.63 0.0 0.0
GO:0010155 regulation of proton transport 10.0% (6/60) 5.17 0.0 0.0
GO:0009657 plastid organization 15.0% (9/60) 3.78 0.0 0.0
GO:0006090 pyruvate metabolic process 16.67% (10/60) 3.47 0.0 0.0
GO:1904062 regulation of cation transmembrane transport 10.0% (6/60) 5.13 0.0 0.0
GO:0006081 cellular aldehyde metabolic process 15.0% (9/60) 3.67 0.0 0.0
GO:0048046 apoplast 15.0% (9/60) 3.66 0.0 0.0
GO:0006364 rRNA processing 13.33% (8/60) 3.98 0.0 0.0
GO:0016072 rRNA metabolic process 13.33% (8/60) 3.98 0.0 0.0
GO:0022900 electron transport chain 10.0% (6/60) 4.93 0.0 0.0
GO:0009532 plastid stroma 18.33% (11/60) 3.11 0.0 0.0
GO:0009570 chloroplast stroma 18.33% (11/60) 3.11 0.0 0.0
GO:0031984 organelle subcompartment 16.67% (10/60) 3.34 0.0 0.0
GO:0009069 serine family amino acid metabolic process 13.33% (8/60) 3.85 0.0 1e-06
GO:0034470 ncRNA processing 13.33% (8/60) 3.78 0.0 1e-06
GO:0008654 phospholipid biosynthetic process 15.0% (9/60) 3.42 0.0 1e-06
GO:0009639 response to red or far red light 15.0% (9/60) 3.42 0.0 1e-06
GO:0015995 chlorophyll biosynthetic process 10.0% (6/60) 4.65 0.0 1e-06
GO:0034765 regulation of ion transmembrane transport 10.0% (6/60) 4.64 0.0 1e-06
GO:0034762 regulation of transmembrane transport 10.0% (6/60) 4.55 0.0 2e-06
GO:0006644 phospholipid metabolic process 15.0% (9/60) 3.35 0.0 2e-06
GO:1901617 organic hydroxy compound biosynthetic process 16.67% (10/60) 3.02 0.0 3e-06
GO:0032879 regulation of localization 11.67% (7/60) 3.92 0.0 3e-06
GO:0033559 unsaturated fatty acid metabolic process 8.33% (5/60) 5.04 0.0 4e-06
GO:0006636 unsaturated fatty acid biosynthetic process 8.33% (5/60) 5.04 0.0 4e-06
GO:0006779 porphyrin-containing compound biosynthetic process 10.0% (6/60) 4.36 0.0 4e-06
GO:0034622 cellular protein-containing complex assembly 15.0% (9/60) 3.19 1e-06 4e-06
GO:0009644 response to high light intensity 11.67% (7/60) 3.85 1e-06 4e-06
GO:0033014 tetrapyrrole biosynthetic process 10.0% (6/60) 4.31 1e-06 4e-06
GO:1901615 organic hydroxy compound metabolic process 18.33% (11/60) 2.75 1e-06 5e-06
GO:0043269 regulation of ion transport 10.0% (6/60) 4.27 1e-06 5e-06
GO:0034660 ncRNA metabolic process 13.33% (8/60) 3.43 1e-06 6e-06
GO:0065003 protein-containing complex assembly 15.0% (9/60) 3.13 1e-06 6e-06
GO:0043933 protein-containing complex subunit organization 15.0% (9/60) 3.1 1e-06 7e-06
GO:0009416 response to light stimulus 21.67% (13/60) 2.36 1e-06 7e-06
GO:0010319 stromule 6.67% (4/60) 5.64 1e-06 9e-06
GO:1901606 alpha-amino acid catabolic process 10.0% (6/60) 4.11 1e-06 9e-06
GO:0009063 cellular amino acid catabolic process 10.0% (6/60) 4.11 1e-06 9e-06
GO:0016114 terpenoid biosynthetic process 11.67% (7/60) 3.64 1e-06 1e-05
GO:0009108 obsolete coenzyme biosynthetic process 6.67% (4/60) 5.53 2e-06 1.2e-05
GO:0006733 obsolete oxidoreduction coenzyme metabolic process 6.67% (4/60) 5.53 2e-06 1.2e-05
GO:0009106 lipoate metabolic process 6.67% (4/60) 5.49 2e-06 1.3e-05
GO:1901565 organonitrogen compound catabolic process 15.0% (9/60) 2.97 2e-06 1.3e-05
GO:0015994 chlorophyll metabolic process 10.0% (6/60) 4.02 2e-06 1.3e-05
GO:0009314 response to radiation 21.67% (13/60) 2.27 2e-06 1.3e-05
GO:0051049 regulation of transport 10.0% (6/60) 3.98 2e-06 1.5e-05
GO:0008610 lipid biosynthetic process 20.0% (12/60) 2.37 3e-06 1.7e-05
GO:0006790 sulfur compound metabolic process 16.67% (10/60) 2.71 3e-06 1.7e-05
GO:0009642 response to light intensity 11.67% (7/60) 3.51 3e-06 1.7e-05
GO:0006721 terpenoid metabolic process 11.67% (7/60) 3.51 3e-06 1.7e-05
GO:0008299 isoprenoid biosynthetic process 11.67% (7/60) 3.45 3e-06 2.2e-05
GO:0006778 porphyrin-containing compound metabolic process 10.0% (6/60) 3.79 5e-06 3e-05
GO:0033013 tetrapyrrole metabolic process 10.0% (6/60) 3.78 5e-06 3.1e-05
GO:0044255 cellular lipid metabolic process 20.0% (12/60) 2.26 6e-06 3.5e-05
GO:0006720 isoprenoid metabolic process 11.67% (7/60) 3.33 6e-06 3.6e-05
GO:0009744 response to sucrose 10.0% (6/60) 3.73 6e-06 3.6e-05
GO:0034285 response to disaccharide 10.0% (6/60) 3.72 6e-06 3.8e-05
GO:0043436 oxoacid metabolic process 25.0% (15/60) 1.9 7e-06 4e-05
GO:0000096 sulfur amino acid metabolic process 11.67% (7/60) 3.28 8e-06 4.4e-05
GO:0044272 sulfur compound biosynthetic process 13.33% (8/60) 2.95 8e-06 4.9e-05
GO:0006082 organic acid metabolic process 25.0% (15/60) 1.86 9e-06 5.4e-05
GO:0035304 regulation of protein dephosphorylation 8.33% (5/60) 4.05 1.3e-05 7.5e-05
GO:0035303 regulation of dephosphorylation 8.33% (5/60) 4.04 1.4e-05 7.7e-05
GO:1901605 alpha-amino acid metabolic process 13.33% (8/60) 2.86 1.4e-05 7.8e-05
GO:0006633 fatty acid biosynthetic process 8.33% (5/60) 3.98 1.7e-05 9.3e-05
GO:0019752 carboxylic acid metabolic process 23.33% (14/60) 1.88 1.7e-05 9.6e-05
GO:0032787 monocarboxylic acid metabolic process 20.0% (12/60) 2.09 1.9e-05 0.000105
GO:0022607 cellular component assembly 15.0% (9/60) 2.54 2.2e-05 0.000122
GO:0072330 monocarboxylic acid biosynthetic process 13.33% (8/60) 2.71 2.8e-05 0.000154
GO:0008652 cellular amino acid biosynthetic process 11.67% (7/60) 2.97 3e-05 0.000161
GO:0031977 thylakoid lumen 6.67% (4/60) 4.39 4.1e-05 0.000218
GO:0009743 response to carbohydrate 10.0% (6/60) 3.21 4.6e-05 0.000243
GO:0015979 photosynthesis 8.33% (5/60) 3.61 5.7e-05 0.0003
GO:0006629 lipid metabolic process 20.0% (12/60) 1.93 5.8e-05 0.000302
GO:0006766 vitamin metabolic process 6.67% (4/60) 4.23 6.2e-05 0.000323
GO:0051174 regulation of phosphorus metabolic process 8.33% (5/60) 3.56 6.8e-05 0.000347
GO:0019220 regulation of phosphate metabolic process 8.33% (5/60) 3.56 6.8e-05 0.000347
GO:0019253 reductive pentose-phosphate cycle 3.33% (2/60) 7.26 6.9e-05 0.000352
GO:0031399 regulation of protein modification process 8.33% (5/60) 3.52 7.6e-05 0.000386
GO:0019344 cysteine biosynthetic process 8.33% (5/60) 3.49 8.4e-05 0.00042
GO:0006520 cellular amino acid metabolic process 13.33% (8/60) 2.48 8.6e-05 0.000427
GO:0006534 cysteine metabolic process 8.33% (5/60) 3.48 8.8e-05 0.000434
GO:0009070 serine family amino acid biosynthetic process 8.33% (5/60) 3.46 9.2e-05 0.000451
GO:0019685 photosynthesis, dark reaction 3.33% (2/60) 7.04 9.7e-05 0.000472
GO:0034641 cellular nitrogen compound metabolic process 28.33% (17/60) 1.4 0.000131 0.000638
GO:0016043 cellular component organization 25.0% (15/60) 1.53 0.000139 0.000673
GO:0009072 aromatic amino acid family metabolic process 8.33% (5/60) 3.32 0.000143 0.000684
GO:0046394 carboxylic acid biosynthetic process 15.0% (9/60) 2.19 0.000143 0.000684
GO:0043155 negative regulation of photosynthesis, light reaction 3.33% (2/60) 6.68 0.000165 0.000777
GO:0010205 photoinhibition 3.33% (2/60) 6.68 0.000165 0.000777
GO:0046395 carboxylic acid catabolic process 10.0% (6/60) 2.86 0.000173 0.000811
GO:0016054 organic acid catabolic process 10.0% (6/60) 2.84 0.000189 0.000877
GO:0009695 jasmonic acid biosynthetic process 6.67% (4/60) 3.8 0.000197 0.000908
GO:0030163 protein catabolic process 8.33% (5/60) 3.22 0.0002 0.000917
GO:0046483 heterocycle metabolic process 26.67% (16/60) 1.4 0.000225 0.001028
GO:0006725 cellular aromatic compound metabolic process 28.33% (17/60) 1.34 0.000229 0.001039
GO:0006396 RNA processing 13.33% (8/60) 2.24 0.000273 0.001231
GO:0016053 organic acid biosynthetic process 15.0% (9/60) 2.06 0.000283 0.001269
GO:0016491 oxidoreductase activity 15.0% (9/60) 2.05 0.000292 0.001299
GO:1905156 negative regulation of photosynthesis 3.33% (2/60) 6.26 0.000301 0.001334
GO:0032268 regulation of cellular protein metabolic process 8.33% (5/60) 3.08 0.000312 0.001371
GO:0044249 cellular biosynthetic process 30.0% (18/60) 1.24 0.000316 0.001383
GO:0051246 regulation of protein metabolic process 8.33% (5/60) 3.05 0.000344 0.001498
GO:0071840 cellular component organization or biogenesis 25.0% (15/60) 1.4 0.00036 0.001558
GO:0009694 jasmonic acid metabolic process 6.67% (4/60) 3.57 0.000363 0.001559
GO:0019748 secondary metabolic process 11.67% (7/60) 2.39 0.000365 0.001561
GO:0006996 organelle organization 16.67% (10/60) 1.85 0.000397 0.00169
GO:1901360 organic cyclic compound metabolic process 28.33% (17/60) 1.26 0.000423 0.001788
GO:0000097 sulfur amino acid biosynthetic process 8.33% (5/60) 2.95 0.000473 0.001987
GO:0044248 cellular catabolic process 16.67% (10/60) 1.81 0.000497 0.002078
GO:0017014 protein nitrosylation 3.33% (2/60) 5.85 0.000545 0.002239
GO:0018119 peptidyl-cysteine S-nitrosylation 3.33% (2/60) 5.85 0.000545 0.002239
GO:0042548 regulation of photosynthesis, light reaction 3.33% (2/60) 5.85 0.000545 0.002239
GO:0016020 membrane 35.0% (21/60) 1.04 0.000581 0.002375
GO:0018198 peptidyl-cysteine modification 3.33% (2/60) 5.76 0.000616 0.002506
GO:0009628 response to abiotic stimulus 25.0% (15/60) 1.32 0.000667 0.002696
GO:0006807 nitrogen compound metabolic process 36.67% (22/60) 0.99 0.000674 0.002709
GO:0043467 regulation of generation of precursor metabolites and energy 3.33% (2/60) 5.68 0.000693 0.00277
GO:0019252 starch biosynthetic process 6.67% (4/60) 3.3 0.000735 0.002907
GO:0016070 RNA metabolic process 16.67% (10/60) 1.74 0.000731 0.002907
GO:0008150 biological_process 91.67% (55/60) 0.3 0.00074 0.002912
GO:1901566 organonitrogen compound biosynthetic process 16.67% (10/60) 1.71 0.000852 0.003337
GO:0010027 thylakoid membrane organization 6.67% (4/60) 3.23 0.000892 0.003456
GO:0009668 plastid membrane organization 6.67% (4/60) 3.23 0.000892 0.003456
GO:0044238 primary metabolic process 41.67% (25/60) 0.86 0.00094 0.003587
GO:0009056 catabolic process 18.33% (11/60) 1.58 0.000936 0.00359
GO:0004176 ATP-dependent peptidase activity 3.33% (2/60) 5.46 0.000947 0.003593
GO:1901575 organic substance catabolic process 16.67% (10/60) 1.69 0.000934 0.0036
GO:0019760 glucosinolate metabolic process 6.67% (4/60) 3.19 0.000979 0.003659
GO:0019757 glycosinolate metabolic process 6.67% (4/60) 3.19 0.000979 0.003659
GO:0016143 S-glycoside metabolic process 6.67% (4/60) 3.19 0.000979 0.003659
GO:0031408 oxylipin biosynthetic process 3.33% (2/60) 5.39 0.00104 0.003868
GO:0061024 membrane organization 6.67% (4/60) 3.13 0.00113 0.004182
GO:0031407 oxylipin metabolic process 3.33% (2/60) 5.26 0.001239 0.004563
GO:1901607 alpha-amino acid biosynthetic process 8.33% (5/60) 2.64 0.001262 0.004624
GO:0019438 aromatic compound biosynthetic process 15.0% (9/60) 1.74 0.001339 0.004883
GO:0010109 regulation of photosynthesis 3.33% (2/60) 5.15 0.001455 0.00528
GO:0005982 starch metabolic process 6.67% (4/60) 3.03 0.00148 0.005346
GO:0006139 nucleobase-containing compound metabolic process 21.67% (13/60) 1.32 0.001631 0.005862
GO:0009658 chloroplast organization 6.67% (4/60) 2.98 0.001681 0.005984
GO:1901657 glycosyl compound metabolic process 6.67% (4/60) 2.98 0.001681 0.005984
GO:0090304 nucleic acid metabolic process 18.33% (11/60) 1.46 0.001871 0.006629
GO:0006631 fatty acid metabolic process 8.33% (5/60) 2.48 0.002018 0.007117
GO:0044282 small molecule catabolic process 10.0% (6/60) 2.18 0.002033 0.007135
GO:0043531 ADP binding 1.67% (1/60) 8.85 0.00217 0.007174
GO:0046905 15-cis-phytoene synthase activity 1.67% (1/60) 8.85 0.00217 0.007174
GO:0046863 ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity 1.67% (1/60) 8.85 0.00217 0.007174
GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity 1.67% (1/60) 8.85 0.00217 0.007174
GO:0008974 phosphoribulokinase activity 1.67% (1/60) 8.85 0.00217 0.007174
GO:0051537 2 iron, 2 sulfur cluster binding 1.67% (1/60) 8.85 0.00217 0.007174
GO:0008465 glycerate dehydrogenase activity 1.67% (1/60) 8.85 0.00217 0.007174
GO:0009496 plastoquinol--plastocyanin reductase activity 1.67% (1/60) 8.85 0.00217 0.007174
GO:0006642 triglyceride mobilization 1.67% (1/60) 8.85 0.00217 0.007174
GO:0009673 low-affinity phosphate transmembrane transporter activity 1.67% (1/60) 8.85 0.00217 0.007174
GO:0035798 2-alkenal reductase (NADP+) activity 1.67% (1/60) 8.85 0.00217 0.007174
GO:0046166 glyceraldehyde-3-phosphate biosynthetic process 1.67% (1/60) 8.85 0.00217 0.007174
GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor 1.67% (1/60) 8.85 0.00217 0.007174
GO:1901700 response to oxygen-containing compound 18.33% (11/60) 1.36 0.003259 0.010729
GO:0009250 glucan biosynthetic process 6.67% (4/60) 2.71 0.003297 0.010807
GO:0004807 triose-phosphate isomerase activity 1.67% (1/60) 7.85 0.004335 0.013841
GO:0009854 oxidative photosynthetic carbon pathway 1.67% (1/60) 7.85 0.004335 0.013841
GO:0046608 carotenoid isomerase activity 1.67% (1/60) 7.85 0.004335 0.013841
GO:0045485 omega-6 fatty acid desaturase activity 1.67% (1/60) 7.85 0.004335 0.013841
GO:0035671 enone reductase activity 1.67% (1/60) 7.85 0.004335 0.013841
GO:0032440 2-alkenal reductase [NAD(P)+] activity 1.67% (1/60) 7.85 0.004335 0.013841
GO:0019216 regulation of lipid metabolic process 3.33% (2/60) 4.32 0.004506 0.014265
GO:1901362 organic cyclic compound biosynthetic process 15.0% (9/60) 1.48 0.004488 0.01427
GO:0104004 cellular response to environmental stimulus 5.0% (3/60) 3.13 0.004933 0.015487
GO:0071214 cellular response to abiotic stimulus 5.0% (3/60) 3.13 0.004933 0.015487
GO:0044265 cellular macromolecule catabolic process 8.33% (5/60) 2.16 0.005256 0.016431
GO:0018130 heterocycle biosynthetic process 11.67% (7/60) 1.71 0.005349 0.016651
GO:0008237 metallopeptidase activity 3.33% (2/60) 4.09 0.006161 0.019098
GO:0019563 glycerol catabolic process 1.67% (1/60) 7.26 0.006495 0.019564
GO:0046184 aldehyde biosynthetic process 1.67% (1/60) 7.26 0.006495 0.019564
GO:0004337 geranyltranstransferase activity 1.67% (1/60) 7.26 0.006495 0.019564
GO:0004362 glutathione-disulfide reductase (NADPH) activity 1.67% (1/60) 7.26 0.006495 0.019564
GO:0019405 alditol catabolic process 1.67% (1/60) 7.26 0.006495 0.019564
GO:0030093 chloroplast photosystem I 1.67% (1/60) 7.26 0.006495 0.019564
GO:0005777 peroxisome 5.0% (3/60) 2.99 0.006441 0.019886
GO:0042579 microbody 5.0% (3/60) 2.91 0.007509 0.022527
GO:0009965 leaf morphogenesis 5.0% (3/60) 2.88 0.007963 0.023794
GO:0042742 defense response to bacterium 6.67% (4/60) 2.33 0.00822 0.024462
GO:0006655 phosphatidylglycerol biosynthetic process 3.33% (2/60) 3.87 0.008304 0.024613
GO:0046471 phosphatidylglycerol metabolic process 3.33% (2/60) 3.85 0.00856 0.025271
GO:0005960 glycine cleavage complex 1.67% (1/60) 6.85 0.008651 0.025339
GO:0019464 glycine decarboxylation via glycine cleavage system 1.67% (1/60) 6.85 0.008651 0.025339
GO:0044042 glucan metabolic process 6.67% (4/60) 2.31 0.008771 0.025491
GO:0006073 cellular glucan metabolic process 6.67% (4/60) 2.31 0.008771 0.025491
GO:1901564 organonitrogen compound metabolic process 26.67% (16/60) 0.89 0.008912 0.025801
GO:0042631 cellular response to water deprivation 3.33% (2/60) 3.8 0.009082 0.025889
GO:0071462 cellular response to water stimulus 3.33% (2/60) 3.8 0.009082 0.025889
GO:0009117 nucleotide metabolic process 8.33% (5/60) 1.97 0.008986 0.025914
GO:0016051 carbohydrate biosynthetic process 10.0% (6/60) 1.74 0.009029 0.025936
GO:0006753 nucleoside phosphate metabolic process 8.33% (5/60) 1.96 0.009173 0.026049
GO:0090693 plant organ senescence 3.33% (2/60) 3.78 0.009349 0.026346
GO:0010150 leaf senescence 3.33% (2/60) 3.78 0.009349 0.026346
GO:0071229 cellular response to acid chemical 3.33% (2/60) 3.76 0.009619 0.027005
GO:0046486 glycerolipid metabolic process 5.0% (3/60) 2.75 0.010208 0.028551
GO:0031978 plastid thylakoid lumen 3.33% (2/60) 3.7 0.010449 0.029008
GO:0009543 chloroplast thylakoid lumen 3.33% (2/60) 3.7 0.010449 0.029008
GO:0016462 pyrophosphatase activity 5.0% (3/60) 2.73 0.010614 0.029355
GO:0004375 glycine dehydrogenase (decarboxylating) activity 1.67% (1/60) 6.53 0.010802 0.029438
GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 1.67% (1/60) 6.53 0.010802 0.029438
GO:0003913 DNA photolyase activity 1.67% (1/60) 6.53 0.010802 0.029438
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.0% (3/60) 2.72 0.010751 0.029626
GO:0016817 hydrolase activity, acting on acid anhydrides 5.0% (3/60) 2.69 0.011311 0.030492
GO:0071482 cellular response to light stimulus 3.33% (2/60) 3.64 0.01131 0.0306
GO:0071478 cellular response to radiation 3.33% (2/60) 3.64 0.01131 0.0306
GO:0010117 photoprotection 1.67% (1/60) 6.26 0.012948 0.034283
GO:0009522 photosystem I 1.67% (1/60) 6.26 0.012948 0.034283
GO:0051540 metal cluster binding 1.67% (1/60) 6.26 0.012948 0.034283
GO:0051536 iron-sulfur cluster binding 1.67% (1/60) 6.26 0.012948 0.034283
GO:0110165 cellular anatomical entity 95.0% (57/60) 0.16 0.01311 0.034588
GO:0044262 cellular carbohydrate metabolic process 8.33% (5/60) 1.84 0.012933 0.034736
GO:0009057 macromolecule catabolic process 8.33% (5/60) 1.83 0.013253 0.034842
GO:0055086 nucleobase-containing small molecule metabolic process 8.33% (5/60) 1.79 0.014849 0.0389
GO:0015035 protein-disulfide reductase activity 1.67% (1/60) 6.04 0.01509 0.039256
GO:0047134 protein-disulfide reductase (NAD(P)) activity 1.67% (1/60) 6.04 0.01509 0.039256
GO:0005524 ATP binding 6.67% (4/60) 2.06 0.015418 0.039968
GO:0042221 response to chemical 21.67% (13/60) 0.92 0.016447 0.042341
GO:0043900 obsolete regulation of multi-organism process 3.33% (2/60) 3.36 0.016404 0.042377
GO:0044271 cellular nitrogen compound biosynthetic process 11.67% (7/60) 1.39 0.016708 0.042864
GO:0030554 adenyl nucleotide binding 6.67% (4/60) 2.02 0.016848 0.042927
GO:0032559 adenyl ribonucleotide binding 6.67% (4/60) 2.02 0.016848 0.042927
GO:0015038 glutathione disulfide oxidoreductase activity 1.67% (1/60) 5.85 0.017228 0.043745
GO:0009073 aromatic amino acid family biosynthetic process 3.33% (2/60) 3.29 0.017804 0.045056
GO:0010033 response to organic substance 16.67% (10/60) 1.07 0.018983 0.047876
GO:0015386 potassium:proton antiporter activity 1.67% (1/60) 5.68 0.01936 0.048499
GO:0071484 cellular response to light intensity 1.67% (1/60) 5.68 0.01936 0.048499
GO:0033692 cellular polysaccharide biosynthetic process 6.67% (4/60) 1.96 0.01968 0.049133
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_98 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_27 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.039 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_65 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_128 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_7 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_14 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_74 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_119 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_138 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_163 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_54 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_69 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_118 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_120 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_124 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_171 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_177 0.083 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_231 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_247 0.055 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_257 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_278 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_2 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.045 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_68 0.043 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_91 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_100 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_127 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_138 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_156 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_177 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_178 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_179 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_180 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms