Heatmap: Cluster_28 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegoniophore (female)
Antheridiophore (male)
Antheridium (male)
Sperm
Sporeling
Thallus
Thallus (vegetative)
Thallus (MpPAP1OX-1)
Thallus (Tak1-2)
Thallus (MpPAP1OX-3)
Thallus (MpPAP1OX-2)
Thallus (Tak1-3)
mid rib (male)
Gametophyte
Gemmaling (female, hpt2040)
Gemmaling (male, hpt2040)
Gemmaling (BC3-38)
Gemmaling (Tak1)
Gemmaling
Gemma cup
gemma cup (male)
Aseptically grown rhizoids, thalloid, gemmae
Control
Cold (3°C)
Dark (3 days)
Heat (33°C)
Light (435 uEm-2s-1)
Osmotic (100 mM mannitol)
Nitrogen deficiency (0 mM KNO3)
Salt (40 mM NaCl)
Cold-Dark
Cold-Light
Cold-Mannitol
Cold-Nitrogen deficiency
Cold-Salt
Heat-Dark
Heat-Mannitol
Heat-Nitrogen deficiency
Heat-Salt
Light-Salt
Mannitol-Dark
Mannitol-Light
Mannitol-Nitrogen deficiency
Nitrogen deficiency-Dark
Nitrogen deficiency-Light
Salt-Dark
Salt-Mannitol
Salt-Nitrogen deficiency
ZT2 (2 hours after light)
ZT6 (6 hours after light)
ZT10 (10 hours after light)
ZT14 (2 hours after dark)
ZT18 (6 hours after dark)
ZT22 (10 hours after dark)
-4.8 -4.24 -3.67 4.85 -2.65 -3.43 -3.55 -2.45 -6.13 -2.4 -2.26 -5.88 -3.68 -1.7 -2.25 -1.29 -2.21 -1.86 -2.46 -1.44 -3.11 -2.34 -0.43 -0.48 -0.75 -0.83 -0.41 0.12 -0.32 -0.3 -0.49 -0.68 -1.02 -0.44 -1.05 -0.54 -1.03 -0.52 -0.93 -0.72 -1.04 -1.31 -0.57 -0.82 0.08 -1.14 -0.57 -0.59 -0.86 -0.58 -0.52 0.29 -0.61 -0.39
-1.78 - - 5.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.22 -2.48 - 5.44 -1.11 -2.39 -2.9 -1.8 - -2.07 - - - -2.48 - - - - - - - 1.04 - -4.17 - -2.29 -2.27 - -4.25 -4.49 -0.76 1.09 -4.39 -0.26 -4.33 -0.27 -4.58 0.04 -4.57 -2.9 -4.52 -1.96 -3.66 - -2.42 - - - - - - - - -
-1.02 -6.02 0.73 5.65 - -4.92 -4.17 -3.73 -4.37 -5.61 - - -5.59 -2.67 - -6.11 -5.82 -4.95 - - - -4.31 -5.15 -5.83 -7.36 -6.02 -3.89 -3.63 -4.82 -4.63 -6.2 -4.22 -5.25 -5.43 -4.65 -6.8 -5.06 -5.97 -7.95 -4.7 -5.91 -6.4 -4.23 - -5.06 - -4.64 -4.18 -4.62 -4.94 -5.23 -5.61 -3.65 -4.55
-2.66 -0.33 1.31 5.55 -3.52 -4.33 -4.67 -4.35 -2.38 - -3.65 - - -4.03 - -4.17 -3.97 - - -4.75 - -2.73 -4.55 -3.04 -5.11 -3.07 -6.06 -3.99 -3.8 -3.38 -1.88 -2.37 -2.39 -1.75 -2.78 -2.63 -4.06 -3.13 -3.86 -3.72 -4.81 -3.81 -3.61 -5.79 -3.9 -2.97 -4.49 -4.76 - -4.64 -5.47 -5.31 -4.31 -
1.45 - - 5.54 - -2.88 - - - - - - - - - - - - - - - - -0.54 - - - - - - - - -0.67 - - - - -0.78 - - - - - - 1.49 - - - - - - - - - -
0.1 -1.56 1.73 4.27 -1.15 -0.26 -1.06 -0.58 0.19 -3.92 -2.27 -0.4 -1.19 -1.14 -2.7 -2.22 -2.87 -2.14 -1.44 -1.33 -1.17 -0.36 -1.67 -5.1 -1.15 -0.0 -1.14 -2.08 -1.24 -1.04 -1.87 -3.18 -2.22 -2.14 -2.56 0.88 0.4 0.57 0.65 -0.02 0.47 -0.89 -0.9 0.63 -0.84 0.89 -0.69 -0.95 -1.78 -1.57 -1.49 -1.25 -0.77 -0.65
- - - 5.68 -2.27 -3.1 -2.38 - -1.11 - - - -4.12 -3.76 - -3.9 - -2.79 - - - - -6.43 - - -4.15 - -4.53 -4.13 -5.61 -5.47 -4.64 -5.53 -4.45 - - -5.75 -3.98 - -5.64 - -5.74 -5.92 - -4.63 - -3.69 -4.13 -2.46 -2.25 -3.03 -3.32 -4.41 -5.31
-1.36 - - 5.64 - -3.48 -3.79 - - -0.57 -0.72 - - - - - - - - - - - - - -1.42 - - -2.79 - - - -1.37 - -1.87 - - - -3.16 - -2.96 -1.4 - - - - - - - - -2.91 - - -2.8 -2.53
-1.02 -0.46 1.93 4.8 -1.4 -1.45 -0.55 -1.44 -3.65 -1.83 -2.02 -2.12 -0.26 -2.66 -1.93 -1.94 -1.91 -2.31 -3.09 -1.09 -2.25 -1.43 -2.01 -3.26 -1.88 0.9 -1.01 -1.98 -2.19 -1.7 -2.74 -3.25 -4.83 -3.13 -4.59 0.33 0.81 0.86 0.78 -1.29 -0.95 -1.27 -2.57 -1.29 -1.26 -1.17 -2.14 -2.53 -2.95 -2.28 -3.14 -1.9 -1.68 -1.64
-0.63 -1.26 - 5.67 -2.85 - - - - - - - - - - - - - - - - - -4.13 - - - - - -1.89 -2.12 - - -1.23 - - - -3.46 -0.96 -3.46 - - -1.83 -3.56 - - - - - - - - - - -
- - - 5.74 -6.54 -6.85 -6.11 - - - - - - - - - - - - - - - - - - -4.46 - -5.4 -4.64 -5.11 - - -3.7 - - - -5.57 - - - -4.42 - - -5.26 - -3.25 - - - - - - - -
-1.82 -1.3 - 5.33 -5.41 -0.93 -0.72 - 0.62 -2.94 - -1.76 -2.18 -0.83 -1.7 -3.1 -1.66 -1.44 - -1.48 0.7 - -1.41 -2.37 -3.96 -1.06 -2.73 -5.24 -1.5 -2.37 -4.23 -2.2 -2.95 -2.66 -3.22 -3.25 -1.63 -1.15 -1.22 - -3.01 -2.26 -3.28 -3.04 -2.01 -2.76 -4.42 -3.11 -2.0 -3.04 -1.48 -2.51 -2.33 -4.03
-2.27 -0.29 2.23 5.49 -7.88 -5.6 -4.56 -4.71 - - -6.01 - -4.89 -4.58 -6.41 -5.5 -6.33 - - -6.12 -4.91 -4.68 -4.17 -5.41 -3.01 -1.17 -3.21 -4.9 -3.88 -4.99 -3.11 -4.62 -5.7 -5.04 -4.82 -2.31 -3.1 -1.01 -2.38 -4.56 -2.74 -3.48 -4.54 -2.72 -3.87 -3.37 -4.12 -4.79 -4.96 -5.03 -5.58 -4.43 -5.39 -4.07
-1.45 - - 5.45 -3.34 -1.36 -1.75 - 1.27 - -0.42 0.21 -2.01 -3.39 - - -1.18 -0.43 - - - -0.68 -2.69 - - -1.08 - -2.42 - -1.12 - -3.41 - - -3.23 - -3.58 - -1.46 - - - -3.57 - - - -3.52 - - - - -2.12 - -2.0
- - - 5.29 - -3.04 - - - - - - -0.07 - - - - 0.3 - - - - - -0.19 - -0.67 - 0.2 - - - -0.47 -1.46 - - - 1.49 -0.55 1.36 - - - - - - - 1.03 - -1.41 -1.57 - - - -
-1.99 1.23 2.47 4.89 -7.35 -0.78 -3.03 -1.96 -1.57 -3.68 -3.84 - -2.16 0.83 0.03 -1.42 -0.38 0.22 - -1.9 - -3.51 -1.35 -1.82 - -1.55 -5.55 -1.12 -2.15 -0.88 -6.13 -1.31 -0.68 -2.3 -0.95 -6.11 -0.44 -1.33 -0.73 -1.84 -4.25 -2.46 -1.49 -6.09 -2.36 - -0.89 -2.58 -1.32 -2.77 -3.85 -2.23 -1.52 -1.74
-1.0 - - 5.73 - - - - - - - - - -1.93 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.27 - - 5.42 -1.72 -3.18 - - - - - - - -2.79 - - -1.9 - - - - - -4.53 -0.85 - -3.77 -1.28 - - - -0.15 0.2 -0.52 -1.1 -1.92 -0.47 -0.16 0.39 0.68 - - -1.32 - - - -2.47 - -2.69 -1.76 - -3.53 - -3.4 -
- - - 5.53 - - - - - - - - - - - - - - - - - - -0.67 - - -0.53 0.86 - - - - - - 0.38 - - -1.58 0.09 - -1.35 - -1.47 -0.55 - -1.39 - - - - - - - - -
0.16 -2.02 - 5.4 - -2.35 -1.73 - 0.63 -0.6 - -0.42 - 0.37 - -2.1 - - - - - - -1.64 -2.61 - -1.49 -1.36 -1.9 -3.79 -1.49 - -2.02 -2.3 -2.32 -1.63 - -4.21 - -2.54 -2.94 - -2.07 -1.65 -1.88 - - -4.08 -1.77 - -3.03 -3.91 -3.69 -1.16 -2.13
-3.15 - 1.39 5.22 -1.27 -1.01 -1.93 - - -1.65 - - -2.41 - - -0.45 -1.85 -0.54 -0.84 - 0.42 -1.35 -0.61 -0.45 - -0.94 - -3.39 -2.28 - -1.49 -3.66 - - -3.53 - -0.77 -0.93 -0.18 - - -2.12 -3.83 -3.56 -3.66 -2.48 - -3.63 -2.46 -0.85 -1.39 -1.19 -0.32 -0.99
-1.41 0.01 0.8 5.37 -2.72 -2.15 -3.78 -2.56 - - -2.89 -1.67 -4.63 -3.27 - -4.02 -3.38 -2.75 -3.06 -3.93 - -3.56 -3.74 -2.27 -1.09 -2.25 - -6.17 -4.21 -3.5 -1.17 -2.37 -3.4 -2.83 -2.57 -0.7 -2.31 -0.6 -2.13 -3.44 0.18 -3.77 -4.2 -0.7 -3.09 0.45 -2.91 -6.38 -5.21 -4.27 - -3.21 -3.52 -4.92
-3.0 -2.49 -0.73 5.63 -2.53 -3.8 -4.66 - - -4.18 -3.63 -2.99 - -4.0 - -1.81 -3.53 -3.08 - -4.25 -3.11 -3.88 -4.06 -4.14 -5.6 -2.87 -3.18 -3.78 - -6.16 -3.36 -2.73 -3.26 -3.75 -3.64 -2.09 -4.08 -3.06 -4.05 -3.93 -3.48 -3.36 -4.86 -6.13 -4.63 -3.57 -3.77 -4.3 -4.6 -3.57 -5.81 -3.53 -3.44 -4.37
-1.99 - - 5.6 -4.37 -2.64 -2.08 -0.58 - - -2.47 - - -3.85 - - - - - -2.51 - - -2.01 -1.92 - -1.1 - -4.65 - - - -2.47 -1.15 -3.65 -1.23 -3.07 -1.63 -2.6 -2.58 -3.77 -4.84 - -2.04 - - - -4.86 -2.81 - - -4.67 -2.49 -3.65 -
-4.69 - -1.98 5.45 - -2.71 -3.98 -2.52 -1.56 -2.22 -1.02 -1.62 -4.57 -1.09 - - - - -2.0 -3.94 - - -2.21 -3.77 - -3.75 -2.27 -2.03 -3.25 -1.42 -6.13 -2.63 -1.81 -2.66 -0.39 - -1.02 -5.35 -1.81 -0.18 - -0.43 -1.33 - -2.18 - 0.19 -2.4 -3.83 -3.68 -5.16 -5.98 -4.82 -4.35
- - - 5.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.02 - - - - - - - - - - - - - - - - -
- - - 5.74 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.69 - - - - - - - - - - - - - - -
- - - 5.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.17 0.21 2.07 5.17 -1.4 -2.2 -2.33 -2.5 -2.77 0.25 -0.59 -0.41 -5.49 -2.65 -2.25 -5.76 -3.17 -5.04 -3.21 -5.74 -3.54 0.4 -3.25 -2.88 - -5.21 -2.81 -1.22 -2.37 -2.52 -5.09 -1.82 -2.14 -2.43 -1.6 -6.34 -3.3 -4.16 -4.95 -2.43 -3.8 -0.25 -1.61 -6.39 -0.94 -5.13 -0.42 -1.73 -4.03 -3.85 -5.2 -3.21 -3.76 -3.86
- - - 5.56 -2.61 -4.43 - - - - - - - - - - - - - - - - - -2.78 -3.33 -1.56 - - -0.91 - -3.69 -1.86 -3.73 0.56 -2.42 -1.6 -2.67 1.21 -2.37 -3.82 - - -4.06 - -2.02 - - -4.88 -3.77 - - - - -
-4.92 -1.18 1.48 5.26 -3.36 -2.02 -3.03 - -1.21 - -1.9 - -3.48 -4.86 - -2.94 - -3.0 -1.64 -2.52 - -2.15 -1.88 -0.74 -1.99 -1.04 -1.21 -2.0 -2.34 -2.0 -3.74 -2.84 -0.37 -3.15 -1.01 -1.25 -0.78 -0.58 -0.75 -1.22 -2.02 -2.09 - -4.87 -2.18 -1.74 -2.14 -1.91 -2.16 -1.88 -2.37 -1.4 -2.05 -1.51
0.71 2.71 -0.13 5.36 -1.24 -5.15 -4.91 - - - - - - -3.79 - -3.54 -3.73 - - - - - - -2.75 -5.3 -3.09 -5.15 -5.73 -3.52 - -5.72 -3.21 -2.39 -2.37 -2.7 -2.1 -3.12 -0.31 -1.91 -4.83 -3.23 -4.28 -4.43 -3.75 -2.99 - - - - -5.9 - - - -
-2.59 -1.12 - 5.49 - -6.13 -3.8 -0.43 - -0.57 -0.15 0.48 - -1.53 - - - - - - - - -2.86 -0.8 - -3.21 - 0.04 -1.76 - - -3.1 -3.05 -2.92 - - - -0.84 -3.14 -0.83 - - -3.31 - - - -3.14 -1.57 - -2.91 - - - -
-3.35 -2.01 -0.98 5.73 -11.1 -8.32 -10.57 - - - - - -8.58 -7.48 - - -7.17 - - - - - -10.85 -4.75 - -10.05 - - -9.78 -9.76 -9.92 -9.99 -7.15 -4.18 -5.65 - -10.22 - -10.06 - - - - - - - -8.49 - - -10.1 -8.63 - -9.6 -
-2.11 1.41 1.67 5.54 -6.13 -4.66 -4.86 - - - -4.17 -2.95 - -4.97 - - - - - - - -2.26 -6.46 -2.95 - -5.61 - - -6.38 - - -3.77 -3.69 -2.57 -3.48 - - - - - - -6.63 - - -6.59 -4.14 -5.12 -4.67 - - - - - -
-1.76 - - 5.57 - - - - - - - - - -3.86 - - - - - - - -0.56 -4.25 -3.41 - -1.69 -0.4 -2.83 -2.26 -4.94 -2.47 - -3.21 -4.78 -3.76 -2.48 -2.3 -2.0 -1.69 -0.96 -4.83 -2.94 -5.1 -3.74 -0.67 -4.88 -3.38 -3.42 -1.34 -4.99 -3.53 -3.62 - -2.97
- - - 5.75 -3.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 5.74 - - - - - - - - - -2.63 - - - - - - - - - - - - - - - - - - - - - - - -1.68 - - - - - - - - - - - - - - - -
-0.62 - - 5.74 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.34 -2.33 -0.26 5.32 -4.51 -1.47 -2.21 - - -2.09 - -0.9 - -1.33 - -2.58 - -2.45 -1.29 -0.21 -1.02 -0.21 -2.27 -4.2 - -2.69 - -2.51 -1.02 -2.74 -4.41 -1.69 -1.26 - -1.21 -4.37 -0.49 -0.37 -0.63 -1.16 - -1.11 -1.94 - -2.14 - -0.51 -3.61 -2.68 -4.26 -4.13 -1.2 -1.62 -4.13
-3.27 -3.41 -3.94 5.66 -6.54 -3.44 -4.06 -3.78 - -3.96 - - -5.12 -1.69 -4.48 - -3.36 - -1.28 - - -3.79 -5.11 -4.94 -6.14 -2.83 -3.95 -6.43 -2.67 -4.68 -3.85 -4.24 -4.84 -3.82 -2.43 - -3.72 -2.41 -3.42 -4.97 -4.99 -5.0 -3.17 -3.09 -2.22 -4.89 -3.19 -6.57 -5.45 -6.29 - -4.68 - -5.17
-1.31 - - 5.69 - -2.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.07 -1.96 - - - - - - - - - - - - -1.22 - -
- - - 5.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.85 - - 5.73 - -8.93 - - - - - - - -6.75 - - - - - - - - - - - -5.31 -6.2 - -5.57 - - -4.16 -6.65 - -5.74 -5.67 -4.15 -1.01 -5.33 - - - -7.06 - -5.7 - - -6.88 - - - - - -
-3.52 - - 5.64 - -7.2 - - - - - - - - -4.25 -2.28 -4.94 -3.58 - - - - -4.15 -3.33 -3.1 -3.43 -4.11 -3.81 -3.58 -3.54 -2.65 -3.06 -3.83 -3.39 -3.4 -2.29 -4.04 -3.1 -3.51 -3.3 -2.26 -3.77 -2.6 -2.06 -1.47 -2.82 -3.45 -3.51 -3.43 -3.21 -4.17 -2.92 -3.59 -3.4
-2.75 -4.78 - 5.73 - -2.84 -6.02 - - - - - -5.41 -4.89 -4.64 - -4.83 - - - - - - - -4.77 -5.04 - -5.83 -4.78 -5.28 -6.84 -4.63 -4.8 -4.02 -5.89 -4.04 -4.77 -5.41 -7.02 - -4.12 -6.0 - -5.88 - -4.5 - - - - - -5.69 -6.53 -
-0.44 - -3.84 5.11 -2.11 -2.19 -1.5 -3.08 -2.8 -4.69 -3.49 -1.86 -4.01 -1.98 -3.69 -4.48 -3.09 -2.57 -1.75 -4.14 -3.3 -1.42 -1.78 -3.52 -1.96 -0.29 -1.48 -1.35 -1.19 -1.2 -3.17 -2.59 -2.5 -2.36 -2.57 -1.56 0.76 0.72 0.63 -0.58 -1.66 -0.37 -1.37 -1.15 -0.0 -2.72 -0.57 -1.01 -2.23 -1.97 -1.95 -2.23 -1.66 -1.94
- - - 5.75 - -9.21 -7.94 - - - - - - - - - - - - - - - -5.54 - -5.98 - - - - - -6.6 -5.15 -5.74 -5.46 - -5.03 - - - - -5.74 - - -5.74 - -5.58 - - - - - - - -
-7.38 - - 5.75 - -7.82 - - - - - - - - - - - - - - - - - - - - - - - - - -4.91 -7.1 - - - -5.83 -5.6 - - - -7.31 -6.46 -6.06 - - - - - - - -5.83 -5.79 -
- - - 5.75 - -6.95 - - - - - - - - - - - - - - - - - - - - - - - - -4.68 - - - - - - - -3.96 - -3.8 - - - - - - - - - - - - -
-3.64 -3.7 -3.76 4.54 -1.05 -2.03 -9.04 -0.23 -3.9 0.05 0.26 -4.41 -1.38 -2.46 -1.84 -1.08 -2.15 -1.69 -0.99 0.35 -1.79 -2.07 -0.89 -0.49 -0.89 -0.52 -0.99 -0.22 -0.7 -0.57 -0.19 -0.38 -0.81 -0.29 -0.55 -0.33 -0.72 -0.18 -0.39 -0.47 -0.63 -1.05 -0.31 -0.56 0.47 -0.77 -0.39 -0.29 -0.97 -0.79 -0.8 -0.12 -0.9 -0.82
-1.93 -4.85 0.96 5.61 -4.87 -4.8 -5.59 - - -3.48 -4.0 - -5.32 -1.92 - -5.1 - -4.91 -3.75 - - -3.25 -4.86 -4.38 -5.17 -2.67 -4.22 -3.34 -5.08 -5.45 - -6.69 -5.06 -3.32 -4.64 - -1.93 -2.4 -2.71 -3.2 -6.66 -4.18 -3.59 - -3.35 -4.32 -3.23 -3.59 -4.89 -6.73 -5.05 -4.37 - -
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-1.27 -1.18 -1.39 4.66 0.17 -0.66 -1.71 1.04 -1.12 0.96 1.11 -0.89 -0.23 -1.47 -1.87 -0.98 -1.92 -1.42 -0.1 0.74 -0.38 0.56 -2.13 -1.65 -0.95 -2.09 -2.61 -1.2 -1.36 -1.7 -1.37 -2.03 -2.21 -1.67 -1.7 -2.0 -2.13 -1.65 -1.92 -2.39 -0.94 -2.06 -1.36 -1.07 -1.13 -1.29 -1.41 -1.57 -1.53 -1.21 -1.26 -1.33 -1.46 -1.41
-1.27 -1.18 -1.39 4.66 0.17 -0.66 -1.71 1.04 -1.12 0.96 1.11 -0.89 -0.23 -1.47 -1.87 -0.98 -1.92 -1.42 -0.1 0.74 -0.38 0.56 -2.13 -1.65 -0.95 -2.09 -2.61 -1.2 -1.36 -1.7 -1.37 -2.03 -2.21 -1.67 -1.7 -2.0 -2.13 -1.65 -1.92 -2.39 -0.94 -2.06 -1.36 -1.07 -1.13 -1.29 -1.41 -1.57 -1.53 -1.21 -1.26 -1.33 -1.46 -1.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.