Coexpression cluster: Cluster_28 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016310 phosphorylation 13.27% (15/113) 2.66 0.0 1e-06
GO:0006468 protein phosphorylation 13.27% (15/113) 2.76 0.0 1e-06
GO:0004672 protein kinase activity 13.27% (15/113) 2.68 0.0 1e-06
GO:0016773 phosphotransferase activity, alcohol group as acceptor 13.27% (15/113) 2.54 0.0 1e-06
GO:0016301 kinase activity 13.27% (15/113) 2.52 0.0 1e-06
GO:0043412 macromolecule modification 14.16% (16/113) 2.27 0.0 4e-06
GO:0006796 phosphate-containing compound metabolic process 13.27% (15/113) 2.3 0.0 6e-06
GO:0006793 phosphorus metabolic process 13.27% (15/113) 2.3 0.0 6e-06
GO:0006464 cellular protein modification process 13.27% (15/113) 2.28 0.0 6e-06
GO:0036211 protein modification process 13.27% (15/113) 2.28 0.0 6e-06
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.27% (15/113) 2.23 1e-06 8e-06
GO:0006334 nucleosome assembly 2.65% (3/113) 6.2 7e-06 6.8e-05
GO:0034728 nucleosome organization 2.65% (3/113) 6.01 1.1e-05 9.2e-05
GO:0065004 protein-DNA complex assembly 2.65% (3/113) 6.01 1.1e-05 9.2e-05
GO:0044267 cellular protein metabolic process 13.27% (15/113) 1.9 1.1e-05 9.3e-05
GO:0071824 protein-DNA complex subunit organization 2.65% (3/113) 5.84 1.6e-05 0.000121
GO:0140096 catalytic activity, acting on a protein 13.27% (15/113) 1.84 1.9e-05 0.000138
GO:0006338 chromatin remodeling 2.65% (3/113) 5.69 2.2e-05 0.000153
GO:0006325 chromatin organization 2.65% (3/113) 5.43 4.1e-05 0.000263
GO:0005524 ATP binding 12.39% (14/113) 1.7 0.000102 0.000627
GO:0019538 protein metabolic process 13.27% (15/113) 1.61 0.000109 0.000639
GO:0044260 cellular macromolecule metabolic process 14.16% (16/113) 1.5 0.00016 0.000894
GO:0030554 adenyl nucleotide binding 12.39% (14/113) 1.62 0.000181 0.000929
GO:0032559 adenyl ribonucleotide binding 12.39% (14/113) 1.62 0.000177 0.000944
GO:0035639 purine ribonucleoside triphosphate binding 12.39% (14/113) 1.48 0.000485 0.002387
GO:0000786 nucleosome 2.65% (3/113) 4.2 0.000565 0.002673
GO:0044815 DNA packaging complex 2.65% (3/113) 4.15 0.000628 0.002757
GO:0032993 protein-DNA complex 2.65% (3/113) 4.15 0.000628 0.002757
GO:0016740 transferase activity 14.16% (16/113) 1.27 0.000931 0.002864
GO:0018995 host cellular component 2.65% (3/113) 3.97 0.000921 0.002906
GO:0042025 host cell nucleus 2.65% (3/113) 3.97 0.000921 0.002906
GO:0033648 host intracellular membrane-bounded organelle 2.65% (3/113) 3.97 0.000921 0.002906
GO:0033643 host cell part 2.65% (3/113) 3.97 0.000921 0.002906
GO:0033646 host intracellular part 2.65% (3/113) 3.97 0.000921 0.002906
GO:0033647 host intracellular organelle 2.65% (3/113) 3.97 0.000921 0.002906
GO:0097367 carbohydrate derivative binding 12.39% (14/113) 1.37 0.000996 0.002988
GO:0034622 cellular protein-containing complex assembly 2.65% (3/113) 4.06 0.000766 0.003038
GO:0017076 purine nucleotide binding 12.39% (14/113) 1.41 0.00079 0.003038
GO:0032555 purine ribonucleotide binding 12.39% (14/113) 1.41 0.000757 0.003104
GO:0032553 ribonucleotide binding 12.39% (14/113) 1.4 0.000834 0.003107
GO:0043168 anion binding 13.27% (15/113) 1.36 0.000734 0.003112
GO:0065003 protein-containing complex assembly 2.65% (3/113) 3.88 0.001096 0.00321
GO:0036094 small molecule binding 13.27% (15/113) 1.29 0.001197 0.003423
GO:1901564 organonitrogen compound metabolic process 13.27% (15/113) 1.25 0.001495 0.004178
GO:0043933 protein-containing complex subunit organization 2.65% (3/113) 3.62 0.001867 0.005102
GO:0000166 nucleotide binding 12.39% (14/113) 1.26 0.002144 0.005611
GO:1901265 nucleoside phosphate binding 12.39% (14/113) 1.26 0.002144 0.005611
GO:0097159 organic cyclic compound binding 19.47% (22/113) 0.92 0.002377 0.005967
GO:1901363 heterocyclic compound binding 19.47% (22/113) 0.92 0.002377 0.005967
GO:0022607 cellular component assembly 2.65% (3/113) 3.4 0.002909 0.007155
GO:0043170 macromolecule metabolic process 14.16% (16/113) 1.08 0.003536 0.008528
GO:0006807 nitrogen compound metabolic process 14.16% (16/113) 0.94 0.008855 0.020945
GO:0044728 DNA methylation or demethylation 0.88% (1/113) 6.43 0.011603 0.025486
GO:0006304 DNA modification 0.88% (1/113) 6.43 0.011603 0.025486
GO:0006305 DNA alkylation 0.88% (1/113) 6.43 0.011603 0.025486
GO:0006306 DNA methylation 0.88% (1/113) 6.43 0.011603 0.025486
GO:0044237 cellular metabolic process 14.16% (16/113) 0.8 0.020338 0.043886
GO:0003677 DNA binding 4.42% (5/113) 1.67 0.020861 0.044241
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_123 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_3 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_10 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_13 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_30 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_44 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_76 0.065 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_97 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_118 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_65 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (113) (download table)

InterPro Domains

GO Terms

Family Terms