Heatmap: Cluster_3 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Diurnal Dark 2h	Diurnal Dark 6h	Diurnal Light 2h	Diurnal Light 6h	Diurnal Light 10h	Diurnal Light 14h	20°C Liquid	4°C Liquid	20°C Desiccation	4°C Desiccation	20°C plate	CadmiumCl 250 µM, 24h	Dark, 24h	HL (900 µmol photons m-2 s-1, 1 h)	Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h	Mannitol 300 mM,24h	NaCl 150 mM, 24h	UV (exactly 385 nm, 1400 µW/cm2, 1h)	pH = 9, 24h
Zci_00009.1	-0.76	-0.94	-1.85	-1.58	-0.76	-0.11	-1.57	-1.16	-1.42	-2.0	-0.11	0.51	1.35	0.42	0.41	0.81	0.81	0.85	0.57
Zci_00037.1	-4.08	-2.89	-1.39	-4.63	-2.19	-1.12	-1.85	-0.71	-1.76	-1.29	-0.05	0.83	1.17	0.11	1.06	1.29	0.85	1.37	0.19
Zci_00294.1	-3.97	-4.08	-3.11	-3.76	-2.83	-1.77	-1.93	-2.7	-1.0	-0.15	0.35	1.04	1.16	0.59	0.72	1.25	0.79	1.31	0.19
Zci_01293.1	-0.1	-0.47	-1.03	-1.15	-0.31	-0.31	-1.38	-1.1	-0.88	-1.0	-0.08	0.59	1.31	0.06	0.48	0.81	0.55	0.42	-0.05
Zci_02832.1	-1.28	-0.85	-1.56	-1.35	-1.55	-0.61	-1.08	0.45	-0.44	0.31	-0.22	0.65	0.71	0.02	0.13	0.92	0.49	0.96	0.1
Zci_03669.1	-0.55	-0.4	-2.05	-1.73	-1.15	-0.41	-2.35	-2.08	-1.78	-1.38	-0.2	1.43	1.07	0.17	0.42	1.07	0.8	0.72	0.13
Zci_04073.1	-1.57	-1.56	-1.23	-1.2	-1.43	-0.95	-1.19	0.46	-0.51	0.88	0.09	1.0	0.3	-0.1	0.5	0.58	0.6	0.42	0.3
Zci_04402.1	-1.32	-0.46	-2.36	-1.49	-0.82	-0.19	-0.82	-1.65	-0.61	-0.44	-0.1	0.53	0.65	0.33	0.55	1.05	0.53	1.18	0.21
Zci_04629.1	-0.27	-0.59	-1.02	-1.27	-0.88	-0.08	-0.54	0.61	-0.36	-0.07	0.06	0.47	0.11	0.0	0.46	0.47	0.5	0.41	0.22
Zci_05006.1	-	-2.3	-	-5.32	-3.79	-2.07	-	-7.52	-	-3.96	0.11	0.86	1.91	0.93	0.49	1.45	0.99	1.8	-1.99
Zci_05015.1	-2.04	-0.93	-1.58	-1.04	-1.41	-0.37	-1.05	-2.39	-2.44	-3.86	0.11	0.77	1.75	0.33	0.14	0.8	0.73	1.07	0.43
Zci_05035.1	-1.63	-2.64	-1.65	-2.04	-1.21	-0.47	-3.49	-1.61	-1.84	-1.09	0.32	1.09	0.32	0.74	0.19	0.82	0.82	1.56	0.79
Zci_05332.1	-1.39	-1.29	-1.87	-2.33	-1.66	-0.91	-2.78	-2.77	0.24	-0.95	0.6	1.46	0.16	0.08	-0.63	0.89	1.84	0.23	0.26
Zci_05713.1	-0.64	-0.96	-1.24	-1.37	-0.88	-0.4	-1.07	-0.68	-0.97	-1.92	0.14	1.13	0.9	0.18	0.35	0.98	0.81	0.58	0.09
Zci_06200.1	-2.2	-1.96	-1.62	-1.13	-0.1	-0.69	-0.55	-2.39	-2.16	-1.59	0.42	0.92	1.13	0.0	0.13	1.1	0.5	1.14	0.57
Zci_06919.1	-1.2	-0.96	-0.98	-1.38	-1.99	-1.91	-0.41	-0.9	-0.75	-1.32	0.08	0.79	1.07	0.19	0.39	1.17	0.73	1.0	0.17
Zci_07424.1	-0.46	-0.42	-0.77	-0.92	-0.8	-0.42	-0.42	-0.5	-0.92	-1.12	0.09	0.75	0.93	0.01	0.51	0.65	0.49	0.52	0.2
Zci_07990.1	-4.22	-3.95	-3.31	-4.72	-3.5	-4.1	-2.47	-2.57	-2.94	-4.2	0.85	1.07	1.71	0.6	1.1	1.1	1.0	1.06	-0.02
Zci_08230.4	-2.92	-2.17	-2.65	-3.91	-1.78	-1.08	-0.23	0.47	-0.23	0.8	0.15	0.47	0.3	0.36	0.61	1.03	0.73	0.77	-0.18
Zci_08316.1	-2.07	-0.91	-2.18	-2.0	-3.02	-0.16	-1.14	-0.23	-0.09	-1.14	0.22	0.82	-0.15	1.21	0.25	0.61	1.51	0.06	0.36
Zci_08720.2	-	-18.63	-3.64	-1.68	-	-	-2.16	-4.69	-1.73	-2.06	0.15	1.87	1.07	0.38	0.01	1.77	1.27	1.12	-0.63
Zci_08778.1	-1.24	-1.01	-2.76	-1.65	-1.46	-1.24	-1.87	-2.31	-1.53	-3.35	0.12	1.13	1.62	0.33	0.49	0.79	1.1	0.44	0.74
Zci_08785.1	-3.0	-2.51	-3.22	-2.81	-2.29	-1.34	-1.68	-0.76	-0.74	0.2	0.51	1.17	0.49	0.35	0.56	0.7	1.3	0.72	0.71
Zci_08948.1	-	-	-	-	-	-	-6.8	-	-	-3.71	-0.78	1.1	2.23	1.11	0.37	1.58	0.36	1.19	0.6
Zci_09048.1	-2.39	-2.06	-2.65	-2.02	-2.44	-1.15	-2.02	-2.14	-0.48	0.13	0.0	1.24	0.96	0.3	0.28	0.98	1.69	0.39	-0.02
Zci_09049.1	-1.84	-2.29	-3.1	-2.8	-2.69	-1.95	-3.67	-2.75	-1.58	-0.45	-0.09	1.53	1.46	0.29	0.4	0.89	1.03	1.3	0.12
Zci_09161.2	-0.75	-0.73	-1.6	-1.94	-1.47	-1.19	-0.49	-0.55	-0.72	-0.73	0.06	0.74	0.85	0.21	0.91	0.93	0.57	1.07	-0.38
Zci_09225.2	-	-	-	-	-	-	-0.99	-3.1	-2.67	-24.91	0.81	0.29	1.14	0.86	0.63	1.32	1.34	1.51	0.87
Zci_09299.1	-	-	-	-21.37	-	-	-	-	-	-3.91	0.29	1.9	2.03	-0.06	0.06	1.47	1.13	1.33	-1.21
Zci_09299.3	-	-	-	-21.37	-	-	-	-	-	-3.91	0.29	1.9	2.03	-0.06	0.06	1.47	1.13	1.33	-1.21
Zci_09331.1	-0.22	-0.44	-1.32	-1.48	-0.85	-0.08	-1.16	-1.14	-0.99	-1.3	0.05	1.0	0.99	0.22	0.33	0.61	0.65	0.65	0.28
Zci_09400.1	-1.63	-1.64	-1.36	-1.51	-1.6	-0.85	-1.17	0.23	-0.85	0.77	0.27	0.76	0.52	0.47	0.39	0.73	0.54	0.58	0.27
Zci_09743.1	-1.94	-2.36	-2.33	-1.69	-1.28	-1.12	-1.64	-3.41	-1.62	-2.15	0.52	1.18	1.32	0.6	0.54	0.99	0.84	0.64	0.76
Zci_09756.2	-	-	-	-	-	-	-	-	-	-	0.33	0.5	1.92	0.96	0.7	1.62	0.92	1.52	0.19
Zci_09805.1	-1.07	-0.74	-2.46	-2.8	-1.1	-1.07	-2.41	-2.65	-1.54	-1.78	-0.01	0.41	1.2	0.25	1.02	1.17	0.75	1.37	0.38
Zci_09933.1	-2.05	-2.64	-3.72	-3.12	-	-1.94	-1.28	-0.32	-0.96	0.02	0.47	1.19	-0.76	0.97	-0.1	1.24	1.79	0.44	0.13
Zci_10160.1	-0.72	-1.33	-1.22	-1.17	-1.66	-0.81	-1.16	-1.62	0.06	-0.18	0.02	0.98	0.47	0.29	0.36	0.83	0.76	0.92	0.38
Zci_10166.1	-0.69	-0.45	-0.69	-1.02	-0.94	-0.37	-1.62	-0.98	-0.58	0.09	0.22	1.18	0.52	0.16	-0.03	0.71	0.77	0.21	0.27
Zci_10172.1	-3.42	-1.94	-2.13	-3.37	-2.88	-3.39	-1.4	-1.7	-1.66	-1.31	0.37	0.73	1.33	0.34	0.85	1.38	0.8	1.09	0.75
Zci_10402.1	-0.72	0.05	-0.95	-1.42	-0.99	-0.48	-2.07	-1.03	-1.45	-0.59	0.29	0.3	1.12	0.2	0.35	1.07	0.75	0.75	-0.05
Zci_11036.1	-1.56	-0.73	-0.01	-0.91	-1.75	-0.57	-1.28	0.09	-0.94	0.22	0.29	0.86	0.48	0.21	0.29	0.5	0.8	0.35	0.21
Zci_11219.1	-0.87	-1.01	-2.64	-1.49	-0.75	-0.88	-2.15	-3.28	-1.88	-3.65	0.12	0.82	1.92	0.38	0.61	0.92	0.42	0.85	0.17
Zci_11467.2	-2.29	-0.37	-2.39	-2.86	-0.97	-1.05	-1.94	-2.0	-3.17	-3.54	0.14	1.32	1.57	0.4	0.35	1.09	0.9	0.65	0.34
Zci_11654.1	-0.25	-1.04	-1.06	-1.68	-0.57	-0.05	-1.8	-1.42	-1.18	0.39	0.19	0.46	1.03	0.12	0.1	0.78	0.36	0.69	0.58
Zci_12185.2	-2.42	-	-12.87	-2.52	-	-	-3.02	-	-7.35	-12.94	-0.02	1.1	1.61	0.28	0.7	1.58	1.12	1.81	-0.32
Zci_12200.1	-1.92	-0.6	-1.29	-1.4	-0.48	-0.15	-1.1	-1.02	-1.21	-1.27	0.61	0.35	0.86	0.5	0.47	0.66	0.54	1.13	0.29
Zci_12384.1	-1.16	-0.57	-2.89	-2.85	-1.0	-0.3	-2.68	-3.37	-3.17	-4.12	-0.2	1.72	1.17	0.3	0.14	1.3	0.73	1.05	-0.08
Zci_12384.2	-1.16	-0.57	-2.89	-2.85	-1.0	-0.3	-2.68	-3.37	-3.17	-4.12	-0.2	1.72	1.17	0.3	0.14	1.3	0.73	1.05	-0.08
Zci_12384.3	-1.16	-0.57	-2.89	-2.85	-1.0	-0.3	-2.68	-3.37	-3.17	-4.12	-0.2	1.72	1.17	0.3	0.14	1.3	0.73	1.05	-0.08
Zci_12408.5	-5.18	-5.11	-5.24	-1.76	-1.66	-2.93	-1.74	-3.51	-1.4	-1.39	0.32	0.78	0.13	0.76	0.4	1.45	0.87	1.73	1.06
Zci_12512.1	-0.03	-0.76	-1.99	-3.17	-1.39	-1.04	-2.73	-4.03	-3.04	-2.11	0.04	1.25	1.09	0.45	0.96	1.14	0.5	0.97	0.29
Zci_12737.2	-25.45	-5.86	-	-1.81	-0.7	-	-6.01	-	-	-	0.15	1.89	1.79	0.4	0.33	1.11	0.64	1.07	0.47
Zci_13001.1	-1.65	-1.37	-2.26	-1.59	-1.33	-0.62	-1.54	-2.06	-2.58	-3.87	0.02	1.39	1.68	0.29	0.63	0.73	0.76	0.42	0.66
Zci_13074.1	-1.31	-2.03	-1.31	-1.44	-1.11	-2.3	-0.77	-2.37	-1.07	-3.3	0.19	0.56	1.17	0.78	0.57	1.16	0.77	1.12	0.46
Zci_13197.1	-4.81	-6.59	-8.79	-6.47	-4.98	-6.41	-1.98	-4.86	-0.48	-0.21	0.48	1.31	0.73	1.39	0.36	0.81	1.03	1.42	0.15
Zci_13197.2	-4.81	-6.59	-8.79	-6.47	-4.98	-6.41	-1.98	-4.86	-0.48	-0.21	0.48	1.31	0.73	1.39	0.36	0.81	1.03	1.42	0.15
Zci_13233.1	-0.69	-2.0	-2.38	-2.96	-1.23	-1.07	-1.61	-2.17	-0.59	-0.53	-0.31	1.04	1.37	0.22	0.35	1.35	0.83	0.8	0.06
Zci_13367.1	-3.05	-1.85	-3.49	-	-4.84	-3.26	-1.11	-3.95	-1.07	0.43	0.55	1.04	0.67	0.6	0.37	0.81	1.89	0.43	0.38
Zci_13672.1	-0.27	-0.65	-1.17	-1.04	-0.51	-0.07	-0.54	-0.58	-0.47	-1.51	0.11	0.49	1.01	-0.06	0.32	0.93	0.64	0.47	-0.05
Zci_13896.1	-2.78	-2.58	-2.42	-1.91	-1.65	-1.4	-2.1	-1.21	-2.52	-2.14	-0.01	0.77	1.12	0.57	0.54	1.19	1.01	1.47	0.68
Zci_14130.1	-0.77	-0.06	-0.71	-0.23	-0.42	0.16	-0.35	0.35	-0.35	0.27	-0.21	0.46	0.01	-0.11	0.23	0.54	0.24	0.54	-0.59
Zci_14593.1	-	-	-2.61	-1.94	-5.19	-3.14	-14.1	-5.07	-21.47	-	-0.19	1.77	1.24	0.05	1.16	1.31	0.52	1.73	0.31
Zci_14593.2	-	-	-2.61	-1.94	-5.19	-3.14	-14.1	-5.07	-21.47	-	-0.19	1.77	1.24	0.05	1.16	1.31	0.52	1.73	0.31
Zci_14697.1	-	-6.35	-	-7.36	-	-2.93	-8.22	-4.41	-18.77	-	0.41	0.9	1.75	0.52	1.77	1.52	1.12	0.13	0.32
Zci_14787.1	-2.8	-1.23	-2.06	-1.49	-1.32	-2.53	-0.24	0.18	-0.42	-0.03	0.14	1.02	0.91	-0.18	0.2	1.05	0.42	1.15	-0.18
Zci_15420.1	-0.7	-0.95	-2.48	-2.25	-2.07	-1.12	-1.11	-0.6	-1.97	-0.89	0.53	1.09	0.14	0.46	0.69	0.87	0.79	1.08	0.6
Zci_15988.1	-1.56	-2.45	-1.77	-1.76	-2.02	-1.23	-1.3	-2.79	-1.54	-4.64	-0.01	0.8	1.95	0.35	-0.35	1.02	0.87	1.19	0.56
Zci_16580.1	-1.0	-1.42	-1.46	-2.23	-2.67	-1.21	-1.56	-2.64	-1.56	-1.69	-0.27	1.06	1.76	0.01	0.52	0.85	0.77	1.34	0.06

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.