Heatmap: Cluster_60 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
-0.49 -0.86 0.0 - 2.02 -0.27 1.16 0.56 0.8 0.72 -0.61 -2.29 - -1.06 -0.96 -1.28 -0.62 0.32 -0.76
- - - - 4.25 - - - - - - - - - - - - - -
-1.37 1.29 -0.45 1.64 - 1.26 -3.17 -1.47 - 1.22 -2.57 - -2.67 1.09 -2.16 0.6 0.2 -0.68 0.22
0.51 1.14 -0.85 1.22 0.74 1.5 -0.19 -2.56 -1.22 -3.44 -1.44 -4.82 -2.24 -0.39 1.17 -1.98 -0.18 0.39 -1.53
- - - - 3.09 - - 2.67 - - - - - - 2.04 - - - -
- - 0.91 -0.54 2.35 0.41 -11.84 - 1.65 2.4 - - - -2.92 - -1.81 -2.56 -0.56 -1.65
-2.08 - 1.58 - 1.62 2.18 0.83 -0.3 -1.12 1.62 - - -4.5 -2.17 -3.63 -1.85 -5.84 -3.2 0.39
- - - - 3.98 - - - - - - - - - - - - 1.67 -
- - - - 3.99 - - - - - - - - 0.57 - - - - 0.69
- 1.62 0.19 -0.77 1.25 1.27 -0.19 -1.92 -0.13 1.04 0.41 - - 0.28 - -0.49 0.0 -0.48 -1.63
- - - 0.9 3.86 - - - - 1.36 - - - - - - - - -
-2.16 1.49 1.48 0.5 1.95 -0.03 -1.12 -2.32 0.81 0.83 -2.35 - - -1.02 -1.14 -3.2 0.14 -1.63 -4.27
- 3.19 - - - - - - - - - - - -0.18 0.24 - - 2.96 -
1.91 0.83 -0.49 0.8 1.8 0.19 -1.81 -0.04 - - -2.42 - - 0.17 0.05 -0.7 -0.48 0.21 -1.66
0.83 0.07 1.84 - 1.6 - 0.58 - - - -0.43 - - 0.22 -1.37 0.66 0.39 1.53 -
- 2.73 - 1.4 2.48 - - -0.01 - 0.6 -0.98 - - 0.19 - - - - -
-1.77 0.93 - -0.49 0.98 0.78 1.64 -3.85 0.78 1.61 -0.41 - -0.25 -0.25 -0.04 -10.35 -1.56 -0.68 -3.97
0.94 1.7 -1.15 - - 1.72 -0.72 - - -0.83 0.03 - - 1.59 0.18 -0.71 0.38 0.59 -1.59
- - - - 2.62 - 0.25 1.74 1.44 0.46 - 0.92 - -2.11 - - - 1.08 -
-23.04 0.14 0.14 -1.36 2.13 - 0.72 - 1.36 0.06 -0.23 -2.96 -1.93 -0.94 1.36 -0.96 -0.23 0.09 -
-0.21 -0.58 0.28 0.76 0.99 2.27 -0.57 0.32 -0.38 1.21 -1.76 - -1.78 -3.08 1.03 - - - -
0.16 -0.51 1.68 0.8 0.84 0.99 -0.07 -2.77 -2.29 -0.24 -2.42 - -2.35 -1.32 -0.54 0.72 0.19 0.96 -3.0
0.87 1.66 -0.39 - 1.29 0.37 - - - 0.09 -1.04 -1.69 -0.5 -1.55 1.13 -0.3 0.51 -0.67 0.64
- 2.3 -1.43 0.59 - 1.32 -1.18 -0.18 0.83 0.06 0.21 - -3.22 0.74 -0.77 - -0.47 0.0 -1.64
-1.16 1.4 1.03 1.47 1.52 0.45 0.22 -0.09 1.28 -0.61 -2.8 - -3.43 -1.67 - -3.31 -3.79 -0.28 -2.9
- 2.56 - - - - - - - - -0.36 1.12 -2.47 0.62 1.4 -1.1 0.26 1.64 0.05
- 1.48 0.91 - 2.37 -0.27 - - - 2.77 - - 0.62 - - - - - -
- - - - 3.73 - - - - 2.52 - - - - - - - - -
- 1.17 - -1.19 0.5 0.11 1.85 - 2.2 -1.01 -0.55 - - -1.55 0.52 -1.93 -0.64 0.72 -3.18
- 1.88 - - 0.77 1.71 0.95 - - - 1.4 - - 0.64 - 0.04 0.58 0.75 -
-0.28 0.53 -1.13 1.21 -0.21 1.39 -0.22 -0.9 0.96 -1.2 -0.06 - -1.71 0.31 -0.31 -0.25 0.17 -0.3 -0.73
2.87 - - - 2.76 - - -0.47 -1.19 - -2.05 - -0.66 -2.33 -2.03 - 1.22 -4.91 -3.34
0.07 -13.52 1.71 - 3.88 - - - - - - - - - - - - - -
1.82 - -0.71 1.35 1.87 -1.87 0.3 - -1.06 - 1.86 - 1.02 -0.67 -1.35 - -12.32 - -
- 2.48 - 2.02 0.74 - - - 0.05 - -2.67 -1.34 -0.15 -1.88 - 0.58 -1.26 0.68 0.49
-5.71 -0.03 1.11 - 3.11 0.94 -0.24 - 1.13 0.07 -3.04 - - - - - 0.17 - -
-0.03 2.05 - 1.36 -2.6 -0.44 -1.19 -2.38 1.03 - -1.04 -1.31 -1.41 -0.21 -2.21 -0.31 -0.33 1.46 0.03
- 2.45 - - - 1.86 0.98 - - - -0.66 - - 1.13 0.09 - 0.68 1.28 -
- - - - 4.25 - - - - - - - - - - - - - -
- - - - 2.55 - 2.66 - - 2.77 - - - - - - - - -
- - - - 3.89 2.05 - - - - - - - - - - - - -
1.44 1.68 0.81 -0.35 2.32 - -1.19 - -0.55 -0.67 -1.44 - - -0.66 -0.32 0.13 -3.91 -0.8 -1.86
-1.12 1.28 - - 2.2 - 0.24 0.14 -0.26 0.26 0.03 -2.79 - -2.02 1.57 0.19 -0.51 -1.52 -0.64
-0.28 0.81 -0.41 0.16 1.64 1.61 -0.24 -2.0 -1.44 2.16 -2.42 - -1.12 -3.45 -3.82 0.46 -4.0 -3.16 -3.7
1.03 - 1.62 1.48 1.21 0.36 -0.03 -1.21 - -1.49 -1.04 -4.25 -1.96 0.16 -1.46 -0.18 -0.91 0.11 -0.05
-0.18 0.52 -1.97 -0.01 -0.25 1.01 -1.41 1.21 -2.26 2.14 -2.11 0.03 -3.78 -0.8 -0.1 0.23 -0.9 -0.69 -3.34
- - 0.81 - 3.52 - - 1.06 - - - - - - 1.46 - -0.1 - -
0.18 0.56 -2.27 -0.69 -0.82 -0.54 -0.81 -0.62 -0.37 -0.96 0.51 -0.95 -0.18 -0.09 0.71 0.86 0.85 1.01 -0.4
- 1.83 - - 2.64 1.04 -0.05 0.97 - - -0.83 - -1.09 0.12 - -1.04 -0.39 -0.23 -
- - 2.31 - 1.63 - - - - 0.44 - - -1.85 -0.73 - 1.6 -1.71 0.91 1.8
-0.98 0.76 -0.37 1.03 -0.29 0.62 0.98 -0.63 0.98 -1.72 -0.02 -5.74 -2.96 -0.12 -1.71 0.42 0.43 0.13 -0.75
- - - - 4.15 - - - - - -2.14 - - -1.44 - - -2.23 - -1.24
- 2.88 - - 2.36 2.12 - - - - - - - - - - - 1.1 -
- 2.47 - - - 2.71 - 1.72 - - - - - 1.29 - - 0.19 - -
- - - 1.36 3.46 - 1.53 1.34 - - - - - - - - - - -
- 2.37 0.73 - - 1.62 - - - 0.79 -1.39 - - - - -0.86 - 2.69 -
- - - 0.96 3.36 - 0.04 - 1.29 - -1.17 - - - - 0.82 0.08 - -
- - - - 4.25 - - - - - - - - - - - - - -
- 2.32 -0.75 0.07 -0.03 2.26 - - -0.47 -0.64 -2.24 - -0.75 0.99 -2.64 -2.55 -0.43 -0.71 -0.44
1.63 2.24 - 1.12 - 2.17 0.87 - - -1.04 - -0.59 - 0.36 - -1.86 - - -
- - - - 3.66 1.83 - - - - 0.98 - - - - -0.23 - - -
- - - - 1.32 -0.83 2.14 0.48 -0.32 0.52 0.29 - -2.72 0.92 0.79 -2.44 1.04 -2.38 -1.08
0.07 1.99 0.68 - 0.1 1.86 -0.07 - - 1.06 -1.97 - -13.88 -0.94 -0.57 0.86 -1.11 -1.06 -1.33
- - 2.24 0.75 1.82 - - 0.69 - 1.06 - - - - 0.68 -0.17 -1.19 1.28 -
- - - - 2.39 2.12 - - 1.72 1.74 - - - -1.16 - -0.36 - 0.63 -
- - 3.18 - 3.31 - - - - - - - - - - - - - -
-0.26 0.42 -1.32 0.12 1.72 0.63 0.88 0.38 0.93 1.54 -3.48 -1.76 -1.83 -4.63 0.06 -2.75 -5.44 -0.67 -
2.08 - -1.12 1.21 2.43 1.35 - 0.24 - 0.11 -2.32 - -2.64 - -0.86 -2.15 -2.67 -0.99 -
2.3 -0.62 -0.29 -0.4 2.89 1.81 - - - - -2.22 - - -2.44 - -2.25 - -1.63 -
- 1.14 - - -1.39 1.22 1.07 -1.05 -0.84 -0.01 -0.32 - -0.66 0.27 -0.69 1.89 -0.8 -0.1 0.55
- 1.85 - - - - 0.32 0.21 - - -1.99 - -1.86 0.07 -0.02 1.62 1.85 1.71 -1.04
0.46 0.95 - 0.74 2.86 0.54 -1.2 -1.31 -1.1 1.16 -2.47 - - -2.69 -3.76 - -0.88 -0.28 -
- 2.82 0.9 2.01 - - - - 1.43 - - - 0.78 -1.25 - -1.98 -0.07 - -
- - - - 3.83 - - - 1.47 - 0.75 - - -1.65 - - - - -
- - - - 4.11 - - - - - - - - -1.53 0.53 - - - -
- - - - 4.25 - - - - - - - - - - - - - -
- - - - 4.25 - - - - - - - - - - - - - -
- 1.56 - -0.07 1.04 1.78 -1.44 - 0.8 -1.36 -0.61 -1.44 -1.15 -2.08 1.14 0.25 0.32 -0.94 -2.11
- 0.9 - 1.97 2.42 0.97 1.46 1.1 - - - - - -0.49 - - - -1.74 -
-0.29 1.17 - - -1.26 -1.1 -1.55 -1.8 -0.93 -1.56 -1.11 - -1.51 0.46 0.56 1.7 1.62 1.53 -0.49
0.62 2.74 -0.95 2.51 -0.04 1.15 -1.2 - -2.09 -0.52 - - - - - - - - -
- 2.94 - - 3.38 - -0.11 - - - - - - - - - - - -
- - - - 4.25 - - - - - - - - - - - - - -
2.19 2.2 - 0.97 - - - - - 0.38 0.58 - -0.44 -0.61 -0.94 0.83 -2.3 0.06 -3.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.