Heatmap: Cluster_218 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
2.44 -1.0 2.98 3.01 2.13 -0.71 2.65 -7.13 -5.7 -5.39 -4.16 -4.23 -8.42 -1.53 -1.53 -2.61 -1.6 1.0 -0.46 -1.86 -1.36 -3.33 -3.92 -0.81 -4.52 -1.64 -1.55 -1.98 -0.63 -5.2 -0.21 -3.55 -3.17 -1.41 -3.04 -1.02 -0.64 -1.7 -3.16 -6.7 -2.87 0.25 -0.7 -4.2 -0.74 0.93 -16.87 -2.71
2.94 -3.96 2.83 2.85 2.55 1.44 2.56 -0.06 -1.51 -1.61 -1.82 2.62 0.53 -6.12 -2.04 -6.03 - - -1.23 -5.22 - - -7.43 -4.19 - -5.98 -3.3 - -2.06 -5.85 -4.25 -9.2 -7.33 -8.48 -7.38 - -0.76 -6.4 -6.22 - - -6.51 -5.86 -4.83 -6.41 - - -4.88
- -9.95 3.59 2.46 3.61 2.48 2.82 -3.35 -3.13 -2.64 -3.56 - -6.56 -1.36 -2.79 -1.57 -7.53 - -0.77 -8.08 -7.81 -7.4 - -4.27 -2.17 -3.87 0.55 - - - -9.9 -1.55 -4.76 -1.44 - -7.45 -3.93 -5.48 0.07 - - - -5.38 - - - - -
2.51 -2.87 3.22 3.16 2.94 1.63 2.94 -2.0 -1.72 -2.73 -2.43 0.84 -2.39 -4.97 -3.69 -7.21 -7.28 - -1.45 -4.43 -7.21 - - -1.53 -7.49 -2.24 - -4.65 0.09 -6.54 -2.37 -5.42 -9.15 -6.56 -8.41 -4.76 -4.48 -6.44 -8.22 - - - - - -6.0 - - -8.09
1.92 -2.95 3.42 3.53 2.68 0.39 3.0 -2.22 -2.1 -3.47 -2.62 -3.32 - -6.0 -4.77 -7.85 - - 1.05 -4.03 -3.88 - - -2.32 -3.27 -3.85 -4.96 -5.13 1.12 -2.38 -3.14 -5.72 -7.27 -5.66 - - -6.72 -4.71 -8.19 - - -5.85 - - - - -9.15 -
1.88 -1.22 2.56 2.51 2.32 1.67 2.53 -1.31 -0.07 -0.76 -0.12 1.75 0.51 -2.05 -1.39 -4.75 - - -0.51 -2.25 -0.51 -2.16 -2.44 -1.07 -5.01 -1.96 -2.09 -3.4 1.81 -4.23 -1.32 -1.97 -3.22 -2.59 -1.2 -1.2 -0.86 -0.82 -5.47 -5.36 -5.8 -1.9 -3.45 -4.31 - - -9.02 -5.28
1.79 -6.18 3.63 3.41 3.23 0.9 3.3 -3.95 -6.76 -4.73 -3.49 - -3.45 - - - - - -3.48 -7.4 - - - -7.91 - - - -4.68 -6.17 - -8.83 -8.39 - - - - - - - - - - - - - - - -
1.41 -3.97 3.23 3.69 2.91 1.09 3.45 -3.16 -4.08 -3.64 -4.79 - -4.12 -5.32 -3.67 - - - -1.85 -5.32 -4.87 -4.92 -3.39 -5.22 -6.01 -5.86 - -4.63 -1.49 -3.45 -6.15 -2.55 -4.09 -5.0 -7.62 -3.15 -4.91 -4.35 -4.46 - - - -4.67 -2.26 -4.66 - - -3.13
1.22 -4.67 2.88 3.0 2.88 2.49 3.03 0.73 0.43 -0.04 -0.77 -1.23 1.06 -7.78 -1.68 - - - 0.07 -5.03 - - - -5.64 - -7.91 -6.97 - -0.97 - -5.18 - - - -11.15 - -5.86 -8.4 - - - - - - - - - -
0.88 -3.9 3.8 3.17 3.32 0.67 2.89 -5.99 -4.81 -3.59 -3.94 -0.18 -4.59 -7.51 - -6.49 - - 0.54 -6.79 - - - -4.64 - -5.55 - - 0.44 - -5.09 -6.15 - -7.73 - - - -8.14 -6.92 - - -4.48 - - - - - -
4.16 -4.64 1.97 1.83 1.6 2.15 2.15 -0.5 -1.79 -3.95 - -0.15 -3.37 -5.94 -1.58 -5.27 -1.75 - 0.87 -4.78 - -4.21 - -2.19 -4.66 -2.09 - -4.13 2.43 - -5.74 - - -6.25 -6.48 - - -9.85 -8.01 - - - - - - - -5.03 -
4.16 -4.64 1.97 1.83 1.6 2.15 2.15 -0.5 -1.79 -3.95 - -0.15 -3.37 -5.94 -1.58 -5.27 -1.75 - 0.87 -4.78 - -4.21 - -2.19 -4.66 -2.09 - -4.13 2.43 - -5.74 - - -6.25 -6.48 - - -9.85 -8.01 - - - - - - - -5.03 -
4.16 -4.64 1.97 1.83 1.6 2.15 2.15 -0.5 -1.79 -3.95 - -0.15 -3.37 -5.94 -1.58 -5.27 -1.75 - 0.87 -4.78 - -4.21 - -2.19 -4.66 -2.09 - -4.13 2.43 - -5.74 - - -6.25 -6.48 - - -9.85 -8.01 - - - - - - - -5.03 -
1.31 -4.22 4.06 1.27 3.78 2.35 1.77 -2.36 -3.09 -1.94 -3.39 0.37 -1.29 -6.2 - - - - 0.51 -5.29 - - - -4.84 - -4.83 - - -1.93 - -5.5 - - -6.34 - - - -5.19 - - - - - - - - - -
2.72 0.56 2.82 2.19 1.84 -1.98 1.99 -4.29 -5.29 -5.0 -3.78 -2.04 -5.05 -1.77 -1.05 -1.55 -2.82 -3.49 -1.02 0.94 -1.43 -0.93 -0.6 -1.86 1.04 -2.48 -4.58 1.07 -1.11 1.48 0.06 0.02 -2.58 -3.14 -0.61 -3.92 -2.9 -1.56 -2.24 - - -1.76 -2.15 -0.22 -2.67 -0.51 -0.95 -1.41
0.84 -4.33 3.79 3.46 3.12 0.3 2.98 - -1.94 - - -3.92 -3.78 -4.65 - - - - -0.26 - - - - -3.97 - -5.01 - -3.81 -0.13 - -4.34 - - - -4.61 - 0.0 -4.7 -6.71 - - - - - - - - -
1.86 -5.05 3.16 3.19 2.79 1.92 2.94 -1.8 -0.45 -3.51 -0.81 -4.1 1.2 -6.02 -2.7 -1.96 -7.06 -7.66 -0.6 -5.52 -4.11 -3.49 -7.43 -2.5 -8.67 -1.38 -5.9 -3.67 -6.65 -7.65 -6.83 -4.02 -2.57 -4.22 -5.17 -5.45 -6.13 -3.6 -3.74 -3.9 - -0.74 -1.56 -4.23 -1.66 - - -4.45
1.27 -4.55 4.43 0.48 3.89 1.94 1.42 -4.59 -4.42 -3.89 -2.55 - - - - -6.07 - - -0.27 -6.68 - - - -5.6 - -7.14 - - -4.41 - -5.55 - - - - - - -8.4 - - - - - - - - - -
2.11 -5.15 3.44 2.48 3.33 2.09 2.89 -1.64 -2.05 -2.94 -2.37 -0.89 -5.83 -5.92 - - - -7.03 -2.49 -6.17 -6.92 - - -2.06 -0.71 -2.25 - -3.45 -2.49 -0.01 -5.86 -1.6 -6.66 -4.86 -6.47 - -6.45 -0.18 - - - - -3.32 -4.89 - - - -7.57
2.83 -4.72 3.23 3.36 2.65 1.17 3.3 -5.18 -3.61 -3.95 -3.32 -9.02 -2.46 -5.69 -5.74 -9.06 - - -1.6 -5.19 -9.75 -9.58 -9.55 -5.27 -5.94 -8.11 -1.46 - -0.63 -9.81 -3.92 - -8.97 -4.49 -12.33 -6.81 -5.65 -9.94 -9.4 -7.26 - - -9.54 - - -0.4 - -
1.21 -1.8 3.0 3.39 2.44 1.36 3.03 1.08 -0.22 -0.47 -0.39 -6.66 -0.48 -3.43 -1.78 -6.03 -4.06 -3.51 0.98 -2.85 -2.8 -4.74 -5.91 -2.05 -7.2 -3.4 -6.06 -2.73 -0.69 -8.71 -0.61 -3.57 -5.22 -5.86 -5.74 -6.93 -3.4 -5.04 -4.09 -2.44 - -3.62 -3.69 -2.26 -5.84 -5.51 -11.13 -4.44
2.51 -4.09 4.03 3.05 2.98 -0.14 2.53 -3.63 -4.62 -3.38 -3.48 0.14 -1.36 -7.81 -6.45 - -7.14 - -0.3 -4.43 - - - -5.62 - -6.23 - -5.82 -2.45 -9.32 -3.91 -10.52 -10.93 -8.4 -11.12 -6.52 -4.45 -10.8 -9.6 -5.05 - - - - - - - -9.66
1.02 -6.14 3.9 2.79 3.41 2.0 2.3 -2.37 -1.85 -2.28 -2.95 1.17 -2.04 - -5.31 - - - 0.12 -6.85 - - - -5.08 - -5.29 - -6.26 -3.55 - -8.79 - - - -10.34 - - -10.71 - - - - - - - - - -
1.79 -5.14 3.16 3.74 2.88 1.39 3.39 -5.64 -2.96 -4.48 -3.42 -7.51 -6.22 -9.73 -6.62 - - - -0.04 -5.89 - - - -6.01 -8.1 -6.19 - -5.58 -1.77 -5.09 -7.34 - - - -9.79 -5.69 - -5.69 -11.74 - - - - - -7.6 - - -
3.01 -1.74 3.49 3.41 2.68 -1.15 2.95 -6.97 -4.96 -5.0 -3.53 -11.64 - -4.42 -4.67 -6.5 -8.31 -7.3 0.41 -2.41 -7.3 -6.62 -8.2 -3.8 -9.93 -4.93 -8.7 -5.83 -2.98 -8.46 -1.41 -6.37 -5.9 -5.0 -7.57 -4.12 -5.26 -3.55 -8.54 -8.48 -10.25 -4.89 -6.35 -2.61 -3.31 - -2.49 -5.78
1.41 -3.8 2.8 2.93 2.67 2.54 2.88 1.68 1.03 -0.55 -0.09 -1.9 -1.59 -4.45 -2.17 -5.26 -6.75 -6.87 -1.02 -3.8 -5.74 -4.76 -3.25 -3.9 -8.68 -4.52 -6.97 -2.73 -1.8 -9.24 -3.58 -3.62 -5.02 -5.01 -3.39 -3.8 -6.13 -3.34 -3.42 -3.78 -6.35 -1.36 -2.2 -2.18 -1.83 - -11.72 -2.21
2.53 0.16 2.55 2.47 2.02 0.07 2.18 -3.25 -3.17 -2.74 -2.05 0.72 -1.95 -1.42 -2.82 -3.25 -3.35 -3.3 -1.99 -0.78 -2.73 -2.14 -0.48 -1.65 -3.99 -2.43 -2.18 -0.29 -2.0 -2.91 -0.74 -0.6 -2.01 -2.05 -0.25 -1.57 -1.3 -1.06 -2.59 -4.6 1.75 -1.17 -1.1 1.36 -0.59 - -5.07 0.34
2.69 -0.71 3.13 3.08 2.84 1.36 2.74 -5.35 -4.13 -4.53 -3.2 -1.98 -4.7 -1.33 -2.57 -4.54 -2.32 -5.35 -0.9 -2.06 -1.37 -2.94 -2.78 -3.15 -5.37 -4.59 -3.38 -1.94 -2.82 -3.04 -1.09 -2.86 -2.77 -3.92 -2.02 -3.38 -2.32 -2.42 -4.08 -5.77 - -0.97 -2.31 -1.04 -2.55 - -6.31 -0.53
2.18 -2.2 3.55 3.26 2.79 0.38 3.17 -3.8 -4.61 -4.57 -3.75 -5.63 -6.53 -3.44 -4.4 -3.81 -4.03 -3.75 -0.39 -2.38 -2.56 -2.81 -2.96 -2.66 -8.03 -4.29 -4.04 -0.33 -1.88 -6.97 -2.34 -6.82 -6.14 -5.68 -8.02 -5.46 -4.15 -3.76 -5.06 - - -4.47 -3.2 -1.36 -4.7 - - -1.31
1.29 -1.87 3.83 2.31 3.47 2.26 2.42 -0.6 -2.89 -3.13 -3.27 -2.73 -1.9 -5.47 - -5.24 -2.79 -2.22 -1.41 -2.94 - - -4.15 -9.73 -3.49 -5.28 - - -1.55 - -1.42 -1.38 -4.55 -4.11 -4.68 - - -5.19 -5.79 -3.1 - - -2.57 -0.55 - - - -2.69
1.57 -5.05 3.76 2.98 3.45 1.2 2.57 - - -3.23 -4.14 -3.32 1.33 - - - - - 0.32 -6.09 - - - -6.1 -6.27 - - -5.74 -3.89 - -7.29 -3.95 - - -8.6 - -6.03 -7.54 - -3.5 - - -5.8 -5.19 - - - -5.96
0.6 -5.08 3.3 2.37 3.19 2.68 2.48 0.18 0.37 -0.18 0.27 -6.87 0.08 -2.85 -1.89 -7.04 -9.27 -7.25 -0.3 -6.0 -11.49 -9.03 - -2.44 -5.54 -4.07 -2.23 -0.83 1.03 -6.03 -4.3 -5.14 -7.98 -6.14 -9.8 -9.13 -4.03 -4.04 -7.07 - - -4.81 -5.56 -10.46 -3.82 - - -8.73
-3.78 -7.11 2.66 3.21 2.58 2.7 3.26 1.49 0.36 -0.66 -0.95 1.19 -1.47 - -0.5 -6.94 - - -1.18 -7.15 - - - -7.21 - - - - 0.23 - -6.89 -5.76 - - -10.34 - - - - - - - - - - - - -
2.1 -3.23 3.47 3.11 3.2 2.07 2.82 -0.43 -1.93 -3.19 -3.52 - -4.03 -7.01 -3.0 -7.9 - -8.98 -0.15 -4.15 - - - -2.45 -6.78 -3.49 - -3.66 -1.96 -7.73 -4.14 -6.89 -7.25 -7.19 -9.74 -8.52 - -1.83 -12.29 -4.9 - - - - -7.42 - -11.07 -
0.25 -4.06 3.9 2.39 3.35 1.73 2.06 -2.14 -3.11 -3.99 -3.89 1.76 -1.91 - - - - - - - - - - - - - - 1.88 -3.41 -0.2 - - - - - - - - - - - - - - - - -3.34 -
2.79 -5.31 3.56 3.37 2.87 1.11 3.05 -3.9 -4.61 -2.47 -2.66 -3.24 -4.82 - - - - - -0.93 -6.4 - -7.48 - -6.85 - -6.56 - - -4.34 - -5.43 - - - - - - - - - - - - - - - - -
2.47 -0.03 1.59 1.2 1.11 -0.68 1.24 -3.77 -3.05 -4.45 -3.91 -6.13 -2.97 -0.86 -1.01 -1.14 -1.63 -1.32 -1.93 -0.23 -1.31 -0.45 0.37 -1.58 -2.67 -1.65 -3.28 0.69 -1.36 -2.54 -0.22 -0.33 -1.23 -1.45 0.7 -1.69 -2.2 -0.81 -2.63 - - -3.12 -1.39 0.54 -0.34 3.65 -11.95 0.16
1.47 -4.44 3.83 3.06 3.59 2.07 2.14 -2.17 -0.86 -3.36 -4.02 -1.9 -4.83 - - - - - -1.77 -7.31 - - - -5.11 - - - -2.86 -5.41 - - - - - - - - -7.35 - - - - - -2.3 - - - -4.04
-0.76 -5.05 2.54 3.04 2.72 2.93 3.11 1.74 1.4 -0.63 0.22 -1.57 -0.69 -7.4 -1.62 -10.67 -8.86 -7.41 -0.48 -6.05 -10.01 -8.33 -9.59 -3.77 -9.07 -4.08 -6.09 -5.54 -1.41 -11.46 -5.23 - -8.11 - -6.04 -6.48 -7.33 -5.84 -10.33 - - - -9.59 - -9.57 - - -
1.46 -4.01 2.73 2.87 3.08 2.94 3.24 0.24 -0.43 -1.73 -1.53 0.55 -1.02 -7.38 -3.71 -8.29 -5.92 -4.62 -1.0 -5.19 -5.7 -6.68 -8.71 -3.65 - -4.74 -7.24 -6.34 -2.45 - -4.1 -9.68 -11.19 -10.85 -11.89 -8.79 -8.95 -6.91 -9.72 - - -7.78 -8.72 -8.11 -8.69 - - -9.79
- -3.05 3.08 2.68 3.5 2.14 2.93 - 1.86 -2.3 1.88 -1.07 - -2.57 - -4.48 - - -4.33 -3.25 - - -2.58 - - - -3.44 - -0.98 - - - -4.97 - -3.1 - -1.95 -4.87 -5.69 -3.37 - - - - - - -8.72 -
2.36 -3.34 3.36 3.43 3.03 1.4 3.2 -4.95 -3.74 -4.49 -3.16 - -8.17 -7.44 -5.08 -9.82 -9.4 -6.88 -3.88 -4.32 -10.67 -10.75 -8.25 -1.75 -8.07 -2.4 -8.07 -3.51 -0.72 -9.77 -3.93 -11.24 -9.73 -9.42 -5.03 - -9.34 -6.51 -8.74 - - - - - - - - -10.37
2.62 - 3.25 2.72 3.1 0.44 2.96 -0.74 -2.78 -2.64 -2.47 - 2.23 -5.46 - - - - 0.39 - - - - -3.6 - -4.49 - - -1.07 - - - - - - -3.42 -2.45 - - - - - - - - - - -
0.4 -4.45 3.73 1.98 3.75 2.76 2.02 -0.88 -3.6 -1.57 -3.98 0.94 -2.36 -5.75 -3.85 - - -5.94 0.2 -4.71 -5.24 - - -3.73 -6.91 -6.98 - -6.35 -2.85 -4.38 -3.19 -4.29 -5.97 -8.58 -6.38 - - -5.35 -9.04 - - -4.49 -4.83 -5.81 -4.41 - -6.32 -6.64
1.33 -4.53 2.71 2.76 2.86 1.97 2.89 0.88 0.21 -0.23 -1.19 1.9 1.84 -7.28 -2.12 -6.58 - -6.02 -0.23 -4.45 - -5.51 - -4.65 - -6.65 -2.68 - -2.39 - -5.08 -7.2 - -1.94 - - - -6.56 - - - - -4.47 - - - -7.88 -5.67
- -3.77 2.9 2.77 3.67 2.68 3.15 -0.72 -0.82 -1.71 -1.38 0.3 -2.03 -5.61 - - - -2.24 -2.86 -7.59 - - - -3.03 - -3.45 - -3.8 0.69 - -5.28 - - - - - - - -5.76 - - - - - - - - -
2.96 -1.81 2.83 2.85 2.53 1.5 2.7 -1.01 -1.34 -3.17 -1.78 0.33 -0.36 -2.7 -4.19 -4.05 -4.32 -4.63 -0.33 -2.55 -3.82 -4.89 -4.63 -2.68 -2.64 -3.51 -2.54 -1.89 -1.26 -1.7 -2.33 -1.76 -4.28 -3.29 -3.01 -4.39 -3.25 -1.46 -4.42 -4.27 -5.54 -4.13 -3.6 -2.32 -5.31 -4.71 1.13 -3.36
3.74 -5.83 3.9 2.62 2.84 -0.42 1.92 - - -3.59 - -4.93 -1.94 - -2.01 - - - -1.3 -5.32 - - - -3.25 - -3.84 - - -1.79 -4.88 -4.88 -5.73 - - - - -2.57 -4.97 -7.84 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.