Heatmap: Cluster_209 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
3.23 - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.14 - - 1.56 1.76 0.45 -2.46 1.23 2.2 2.63 - - - - - - - - - -
- -6.61 -0.9 - - -2.8 - - - - - - - -0.11 - -2.46 - - -4.46 -3.12 - -0.98 -0.86 -3.16 - -2.88 -2.78 - - -5.54 -5.65 -1.35 1.07 -0.46 -1.92 1.74 4.36 2.37 3.41 - - -3.78 - - 0.36 - - -
2.38 0.38 -5.84 - - -4.75 -5.28 -0.24 -4.7 -3.63 -5.94 1.81 -1.92 0.45 -0.84 0.05 -1.02 -0.38 -1.59 0.01 2.38 0.05 0.19 -0.84 -1.63 -0.34 0.96 -2.25 -4.18 0.16 -2.51 -0.46 -0.19 -0.02 0.07 -0.61 0.69 1.04 0.25 -3.01 -0.44 1.02 1.82 0.06 -0.32 - - 0.12
-1.53 -3.37 -5.34 -4.94 -4.77 - -4.56 -6.17 -8.34 -6.27 -6.49 -5.86 -7.75 2.09 -2.9 -1.43 -4.5 -3.57 -3.15 -1.84 -3.96 -1.8 -3.77 -3.93 -0.42 -3.58 -2.51 -0.9 1.02 0.04 -4.02 -1.32 1.3 -0.64 -2.63 -0.07 3.14 2.53 4.01 -0.68 -3.31 -1.97 -3.25 -3.84 -3.56 - -2.07 -4.74
-2.03 -7.89 - -4.04 - -2.93 - -1.57 - - - - 3.1 - -2.97 -0.3 -3.24 -4.36 -5.58 -7.37 - - - -1.64 -2.76 -0.72 1.42 - -2.18 -1.94 -5.52 0.1 -0.01 -1.18 -7.31 -1.71 -1.02 -1.78 1.25 -3.84 - 4.12 2.77 - 1.3 - - -1.03
-1.41 -6.27 - - - - -3.83 - -1.62 - -5.5 - - -3.06 -4.38 1.36 - - - -5.63 -4.58 - -4.47 -2.33 -5.86 -2.73 -4.58 - -6.79 -7.2 -2.67 - 0.23 -7.52 -5.71 -1.45 2.15 0.78 5.15 -1.56 - -4.45 - - -5.37 - - -
-10.12 -5.65 - -8.23 - - -9.57 - - -10.55 - - - -4.5 -4.96 -5.09 -9.28 -5.92 -7.69 -5.72 -7.82 -3.0 -1.31 -6.72 -6.26 -7.26 -4.92 - -9.51 -5.97 -9.07 1.92 1.69 3.14 -0.9 -0.39 3.1 1.05 3.92 -3.31 - 1.91 -2.03 - -2.02 - - -6.38
- -1.81 - - 0.93 - - - - - - - - - - - - - 0.08 - - 1.07 - - - - - - 0.68 - - - - - -2.79 2.02 3.07 -0.68 3.52 - 4.03 - - - - - - -
-1.44 0.19 -1.22 -3.77 -2.83 - -4.97 - - -8.16 - - - -0.26 -1.0 -1.01 -1.82 -0.39 -1.38 -0.36 -3.67 -0.87 -0.82 -1.34 -0.92 -0.63 -3.5 1.52 -1.47 -2.85 -0.99 0.24 2.16 1.31 1.14 0.62 2.48 1.14 1.27 -3.82 -6.4 3.15 0.15 -3.34 1.33 -2.4 - -2.77
-7.12 -1.86 -6.75 -2.41 -5.9 -5.14 -2.16 -4.34 -6.31 -6.33 -6.61 -3.74 -4.58 -2.72 0.08 -0.34 -10.83 -7.74 -3.02 -2.5 -3.77 -0.57 -2.89 -1.46 -1.96 -0.56 1.53 -6.38 -7.55 -6.44 -5.68 -1.69 3.24 1.69 -2.34 -0.5 2.93 1.26 1.05 1.83 0.05 2.2 0.99 -1.89 -0.48 -3.62 -16.37 0.5
- - - - - - - - - - - - - - - - - - - - - - - - 4.85 - - - -0.01 4.07 - - - 0.23 - - - -2.46 -3.55 - - - - - - - - -
-0.32 0.11 0.22 -0.35 0.17 -0.5 -0.29 -3.98 -4.72 -5.97 -6.87 -10.25 -7.03 -0.26 -0.19 0.47 -0.01 0.34 -1.61 0.12 -0.47 0.47 0.79 0.5 -1.66 0.44 -0.26 0.63 -1.97 -1.72 -0.09 0.33 1.56 0.84 0.39 0.27 0.17 0.64 -0.0 -1.67 -7.59 1.06 1.02 1.21 1.39 -1.91 -3.42 0.92
0.61 -1.14 -6.15 -7.85 -5.39 -9.83 -6.04 -6.45 -5.27 -8.17 -5.64 - - -1.57 -2.57 -0.98 -4.31 -4.57 -3.46 -0.36 -4.28 -3.05 -1.74 -1.51 0.78 -1.42 -3.3 0.65 -2.07 1.34 -4.05 1.11 0.93 2.23 0.47 0.8 2.99 1.86 3.52 0.63 -8.14 -6.86 -3.31 -7.77 -6.35 - -8.99 -8.23
-3.92 -2.29 -4.81 -4.36 -5.25 -7.41 -5.22 - - -9.75 - - - -1.17 0.03 2.51 -5.32 -6.2 -3.62 -1.71 -5.37 -0.83 -2.74 0.53 -0.44 1.61 2.31 -6.64 -0.96 -2.06 -4.57 -2.96 -0.42 -1.76 -4.8 -0.5 4.06 0.52 1.32 -2.27 - 1.25 -1.01 -5.28 -3.46 - 1.25 -2.49
-6.33 - - - - - - - - -1.38 - -5.09 - 3.22 - - - - - - - - - -2.14 - - - - - - - - 2.99 1.1 - - - 4.75 -0.12 - - - - - - - - -
1.0 -1.42 -4.04 - - - -3.93 - -3.9 - -4.13 - -4.42 0.52 -0.49 1.66 - - -4.34 -0.29 - -0.96 -1.54 -0.88 -1.56 -1.0 0.86 - -0.06 -2.58 -2.33 -0.8 0.14 -0.98 -2.63 -0.75 0.2 1.94 3.64 -0.01 1.38 3.08 0.21 -2.89 - - - -4.7
-10.54 2.69 0.51 -1.34 - 0.48 0.83 1.13 -0.07 -0.11 -3.06 -3.34 -0.99 0.81 - - 2.18 0.65 0.62 1.09 - - - -2.06 - - - -4.96 0.32 -0.83 2.53 - - 0.7 -1.37 - - 1.44 1.42 - - - - - 1.93 - 0.2 -
-4.86 -0.71 1.24 2.3 1.79 -0.06 2.16 - - -4.58 -5.16 - - 0.0 -1.24 0.3 -2.3 -4.58 -2.83 -2.49 - -0.77 -1.75 0.15 -2.02 0.28 0.85 - -6.3 -4.07 -2.35 -1.8 0.25 -0.1 -1.14 1.06 3.35 1.88 0.92 -2.16 - -0.12 -2.71 - -1.33 - - -6.12
-1.77 -6.18 - -4.78 -5.45 - -6.32 - - -7.7 - - - -2.04 - 0.39 -6.56 -5.23 -4.44 -3.61 -5.49 -4.36 -3.98 -7.45 - -6.47 -4.49 -6.24 -2.7 -7.13 -7.97 -2.53 -1.34 0.95 -0.84 -0.38 2.22 0.97 2.39 -0.3 4.63 1.66 -1.07 -5.69 -1.36 - - -2.45
2.69 3.37 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.38 - - - 3.38 - - - - - - - - - -
-3.4 - - - - - - - - - - - - - - - - - - - - - - -0.15 -0.29 0.2 - - - 2.73 - -0.89 1.76 - -5.29 4.83 - 1.91 1.17 - - - - - - - - -
- -4.69 - -2.43 - - - - - - - - - -3.88 - - - - - -5.9 -2.55 -2.86 - -3.06 -1.7 - - - - -0.8 -3.8 - -0.7 - - 5.47 - -0.15 -1.45 - - - - - - - - -
-1.63 -0.61 - - - - - -2.06 - -3.76 - - - 0.34 2.91 2.0 -1.37 -0.8 -5.07 -0.58 0.97 2.67 1.22 1.43 -3.47 1.55 -0.34 - -2.64 - 0.48 -1.54 2.04 - -3.91 2.44 -2.23 0.96 0.52 - - - - - - - - -
-2.64 -1.26 -0.73 -1.43 -1.81 -2.75 0.24 - - -4.49 - - -2.07 -2.13 - -0.74 -1.97 -1.13 -0.85 -2.92 -5.41 0.02 -2.12 -1.57 -3.28 -1.95 -2.18 -0.03 - -4.75 -1.71 -0.65 1.51 -0.46 0.75 1.81 2.67 1.92 0.94 -1.24 -0.15 2.82 1.67 0.04 0.74 - -5.73 1.61
-1.96 0.49 -3.28 -4.46 -5.35 - -5.46 -4.49 -4.82 -3.36 -5.0 0.93 -0.09 0.5 1.85 1.41 2.19 0.56 -2.45 0.5 -1.28 0.42 -0.41 0.25 -2.35 1.02 -1.98 -3.56 -0.34 -1.48 -0.65 -0.15 1.21 0.26 -0.13 0.3 0.25 0.66 1.31 -3.0 0.99 1.31 0.05 -2.0 0.45 - -1.32 -1.86
-9.15 -1.01 - -5.68 -4.74 - -4.61 - - - - -6.47 -5.5 1.48 1.68 2.28 1.32 -1.29 -1.36 -2.73 -3.94 -1.72 -3.02 -2.46 2.88 -1.87 0.77 - -6.95 2.19 -3.06 1.09 1.67 -3.65 -3.59 -0.62 2.13 2.29 1.36 -4.25 -3.99 -5.65 -2.47 - -3.39 - - -6.74
0.29 -1.04 -7.22 - -5.57 -7.13 -5.89 - - -8.38 -6.79 - - -1.53 -2.35 1.29 -0.26 -0.84 -1.31 0.6 -1.69 0.94 1.1 0.97 -0.28 1.07 -2.2 -1.2 -1.16 -0.33 -1.52 -0.88 1.72 2.33 0.97 1.32 2.8 2.0 1.05 -6.71 -4.32 0.06 -1.8 -4.07 -0.75 - -11.9 -6.84
-3.61 -5.91 -3.85 - - - - - - - - -2.17 - -5.33 - - - - -5.42 -5.73 - -4.46 -5.21 -3.2 4.45 -2.52 -2.93 - - 4.28 -4.89 -1.07 -2.69 -3.38 -6.31 0.4 -0.42 0.01 -3.14 - - -0.12 -0.29 - -5.19 - - -
0.03 0.13 -0.35 -0.53 -0.49 -1.21 -0.46 -2.66 -2.31 -2.63 -2.7 -5.43 -0.21 0.36 -0.58 0.5 0.11 0.25 -1.12 0.03 -0.36 0.42 0.47 -0.27 -1.57 -0.41 0.55 0.47 -0.68 -2.17 -0.41 0.9 0.47 0.53 0.49 1.15 -0.03 0.65 -0.61 -1.15 -1.31 1.09 0.72 0.99 1.33 0.32 -2.54 0.93
-6.06 -2.59 - -9.23 - - -7.16 - -9.53 -9.31 -8.48 - - 1.64 -6.13 -0.78 -5.62 -6.42 -6.15 -2.98 -4.1 -5.1 -5.48 -0.14 0.6 0.24 1.34 -9.08 -4.77 1.06 -1.09 -2.46 1.55 3.06 -3.25 2.17 1.39 2.49 2.04 -5.7 -2.24 2.18 -1.51 -2.05 -1.18 -0.73 - -1.95
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.24 - - - - 5.27 - - - - - - - - - -
-0.03 -2.18 - - - - - - - - - -6.24 - -1.92 0.63 - - - - - - -4.34 - -1.66 - -5.02 - - - - - - 3.82 3.97 -7.82 -2.89 -3.79 3.32 -0.29 - - 0.68 -1.5 - -3.81 - -6.79 0.74
- 2.05 - - - - - - - - - - - 2.22 2.06 -0.06 -7.23 -4.74 -3.57 3.21 -1.73 2.79 1.97 -0.49 -7.56 -1.65 -1.65 -7.03 -6.83 -5.8 -1.81 -5.5 -0.96 -5.05 -0.41 2.31 0.6 1.38 0.13 -1.64 -6.97 - - -4.89 -7.06 - - -4.25
- -2.8 - - -1.35 - - - - -2.49 - - - -0.3 - 2.15 -1.09 - -2.5 -4.48 - - - -6.41 - - - - - - - -2.89 0.07 -2.96 -1.21 0.11 3.32 3.78 3.81 - - - - - - - -0.46 -
-3.81 -3.5 -6.94 -6.98 -5.89 -8.23 -7.06 -11.71 -11.54 -11.83 - -8.22 -8.59 -2.32 -5.2 -0.61 -6.18 -6.29 -5.96 -3.76 -5.3 -5.8 -6.12 -3.76 1.34 -2.66 -3.83 -4.23 -3.98 1.77 -4.67 -2.35 0.16 3.21 -4.64 -1.04 0.75 2.35 3.64 -1.96 0.51 2.54 -2.81 -4.53 0.16 - 0.21 -5.98
-3.86 - - 1.74 -2.71 - 1.87 - -0.81 - -2.15 - - -2.38 - 2.0 - - - -5.43 -4.05 -3.64 - -2.24 -3.02 -1.52 1.38 -3.57 1.98 - - -4.34 0.12 -4.34 -7.77 -0.37 -2.28 3.05 4.1 - - - - -3.02 -1.01 - - -3.7
4.52 1.3 -3.14 - -0.62 -0.03 - -1.51 - - - -0.28 -1.36 0.19 - - - - - - - - - -1.85 - - - - -2.97 - - - 1.07 3.61 - - - 1.72 -4.38 - - - - - - - - -3.67
-5.76 -8.06 -1.34 -3.55 -1.71 -5.08 -5.06 - - -10.21 -8.62 -5.93 - 3.15 - -1.49 -7.11 - -3.34 -8.49 - - -8.6 -6.33 -4.76 -7.65 -0.7 - -3.02 -6.46 -3.67 -1.57 0.63 3.3 -9.74 1.12 1.39 0.35 3.7 - - 1.78 -3.97 -1.32 0.53 - - -0.44
2.29 -5.1 -2.73 -4.99 - - -3.48 - - - - - - 0.35 - 0.37 - - -6.92 -5.08 - -2.53 - -0.53 -4.39 0.13 - - -0.63 -4.44 -5.1 -3.13 0.75 0.15 -4.77 1.37 4.48 2.01 1.93 -4.94 - 0.34 - - -0.98 - - -
-2.15 -2.34 -5.27 - - - - -5.76 - - - - - 1.44 -0.34 -0.67 -3.07 - -3.07 -4.24 -5.35 -5.17 -2.9 -0.09 -2.97 -0.72 -0.7 -5.1 0.96 -3.42 -0.23 -4.07 0.03 1.94 -2.52 0.48 3.0 1.6 4.01 -5.03 -0.29 -0.14 -4.13 - 1.15 - - -
-5.32 0.4 -6.62 -4.73 -5.98 -6.37 -4.28 -7.45 -8.39 - -6.24 - - -0.15 2.04 1.83 -1.97 -4.85 -2.41 0.54 0.7 1.94 0.97 1.07 -4.58 1.67 -2.23 -7.95 -4.41 -6.53 -0.31 1.32 2.21 0.07 -1.13 1.99 -0.84 1.63 0.35 0.3 1.71 -4.06 -7.97 - -3.8 - - -9.07
-6.18 -5.11 -6.04 -2.38 -4.43 -4.24 -2.35 -6.7 -7.16 -9.97 - -7.97 -7.5 -1.54 -2.51 -2.41 -2.82 -4.87 -4.28 -4.18 -6.28 -1.63 -2.39 -5.21 -5.97 -5.37 -2.73 - -8.14 -5.99 -5.5 -2.83 1.66 -0.99 -2.43 0.64 4.15 1.4 4.29 -5.31 -5.16 -5.8 -4.21 - -5.13 - - -
2.7 -0.8 -4.11 -3.64 -2.09 -2.04 - - - - - -8.59 - 0.98 - 1.25 2.45 1.23 -2.06 -1.34 -1.37 -0.46 -2.01 0.21 0.85 0.81 -1.34 - 0.52 0.55 -6.08 -0.37 0.18 1.26 -4.38 1.28 2.63 0.9 0.88 -0.54 - -2.64 -3.55 - - - -1.04 -4.73
-0.62 0.22 0.16 0.22 -0.35 -0.69 0.07 -2.03 -2.34 -6.32 -5.15 -5.45 -4.99 -0.35 -0.47 -0.22 -1.67 -1.17 -2.16 -0.17 -1.42 -0.19 -0.29 -0.35 -0.46 -0.07 1.12 0.59 -0.51 -0.25 0.15 -0.52 0.61 0.35 0.07 0.83 1.77 0.81 0.3 -1.19 0.39 1.21 0.52 0.48 1.28 -0.66 0.32 0.92
-2.09 -0.9 -4.44 -5.42 -4.44 -4.75 -5.18 -5.58 -7.15 -7.5 -7.42 -5.94 -6.0 -0.65 0.69 0.76 -1.47 -1.16 -0.86 0.88 -1.27 -0.48 -1.54 0.03 2.19 0.54 -0.05 -1.75 1.01 2.94 -2.39 2.57 0.99 0.3 -2.54 0.56 0.92 1.0 1.3 -1.09 -0.11 -0.86 -1.13 -2.93 -2.12 -3.72 -13.17 -2.6
-12.56 -4.69 1.9 3.24 1.76 -0.39 3.0 -8.0 -5.2 -3.84 -3.14 -9.45 -1.85 0.25 -2.6 -3.99 -4.21 -6.06 -0.64 -5.13 -4.7 -4.18 -2.57 -0.76 -4.57 0.23 -1.26 -9.05 -5.68 -6.12 -6.79 1.16 -3.02 -3.88 -4.93 1.6 1.5 2.15 0.75 -9.13 - -0.03 -0.03 -1.18 -1.44 - -10.72 -2.11
0.69 -3.81 0.71 -1.25 - - -1.17 - - - -4.09 -2.46 - -1.22 - -15.73 - - 1.0 1.86 -0.01 0.9 - 0.18 2.62 1.4 - - - -1.0 0.85 2.91 -0.25 0.69 0.8 1.64 -20.84 -1.29 -4.55 - -2.16 - - - 2.74 - - -2.04
-5.01 -0.22 1.67 1.88 2.05 -2.42 2.22 - -5.58 -5.1 -6.51 - -2.22 -0.65 0.41 0.05 0.37 1.08 1.04 -0.4 0.73 -0.33 -0.48 0.88 -0.81 2.22 0.82 - - -1.88 -2.84 -2.65 -1.64 0.02 -6.27 -2.47 0.31 0.54 0.3 - - -3.47 1.09 -3.8 0.15 - - -1.54
- -2.71 - - - - - - - - - - - -1.88 - - -1.06 -2.58 -2.83 -6.28 - -3.21 - -3.57 - -3.04 - - - - - -5.68 0.24 - - 5.42 - -0.05 0.55 - - - - - - - - -
- - - -1.94 - - - - - - - - - - - - - - - - - - - - 2.55 - - - - 3.19 - - 0.54 - -4.25 4.87 - -0.21 0.15 - - - - - - - - -
- - - - - - - - - - - - - -2.61 - 2.4 - - - -5.35 - - - -7.18 - -3.75 - - -0.15 - -2.56 - -1.34 -1.4 -3.48 -0.09 2.14 1.21 5.0 - - - - - -0.58 - - -2.8
0.39 -0.85 -8.68 - -9.23 -6.21 - - - - -7.68 - -6.74 -2.1 0.28 2.52 3.04 2.44 -0.6 0.11 0.44 0.62 0.01 -3.37 -4.54 -3.07 -1.93 -7.51 -2.78 -5.56 -1.91 -0.86 1.46 -0.49 -0.22 0.27 2.56 1.03 2.14 -2.36 - -7.63 -8.54 - -6.54 - - -
-0.21 0.02 2.0 2.38 1.43 0.05 1.98 -2.7 -3.65 -4.55 -4.04 -1.06 -3.24 -0.84 -0.68 -0.78 -2.1 -1.43 -1.62 -0.2 -1.36 -0.49 -0.45 -0.09 -5.33 0.25 -3.42 0.72 -1.86 -6.61 1.09 -0.39 2.08 -1.24 -0.08 -0.79 0.62 -0.18 -1.31 -1.38 -3.85 -2.53 -0.8 1.05 0.61 -9.96 -1.15 0.69

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.