Coexpression cluster: Cluster_209 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000160 phosphorelay signal transduction system 15.09% (8/53) 5.06 0.0 0.0
GO:0009873 ethylene-activated signaling pathway 15.09% (8/53) 5.22 0.0 0.0
GO:0035556 intracellular signal transduction 22.64% (12/53) 3.7 0.0 0.0
GO:0009755 hormone-mediated signaling pathway 20.75% (11/53) 3.04 0.0 7e-06
GO:0006952 defense response 26.42% (14/53) 2.54 0.0 8e-06
GO:0044419 biological process involved in interspecies interaction between organisms 22.64% (12/53) 2.29 4e-06 0.00026
GO:0007165 signal transduction 24.53% (13/53) 2.19 3e-06 0.000266
GO:0051707 response to other organism 22.64% (12/53) 2.3 4e-06 0.000279
GO:0009607 response to biotic stimulus 22.64% (12/53) 2.2 8e-06 0.000391
GO:0098542 defense response to other organism 18.87% (10/53) 2.49 9e-06 0.000402
GO:0043207 response to external biotic stimulus 22.64% (12/53) 2.2 8e-06 0.000428
GO:0009620 response to fungus 13.21% (7/53) 3.06 1.9e-05 0.000777
GO:0006950 response to stress 35.85% (19/53) 1.45 2.3e-05 0.000838
GO:0009861 jasmonic acid and ethylene-dependent systemic resistance 3.77% (2/53) 7.44 5.4e-05 0.001856
GO:0031347 regulation of defense response 13.21% (7/53) 2.81 5.8e-05 0.001875
GO:0042742 defense response to bacterium 11.32% (6/53) 3.1 7e-05 0.002115
GO:0002682 regulation of immune system process 11.32% (6/53) 3.01 9.8e-05 0.002252
GO:0050776 regulation of immune response 11.32% (6/53) 3.01 9.8e-05 0.002252
GO:0080134 regulation of response to stress 13.21% (7/53) 2.74 8e-05 0.002271
GO:0009625 response to insect 5.66% (3/53) 5.12 8.9e-05 0.002391
GO:0045088 regulation of innate immune response 11.32% (6/53) 3.01 9.7e-05 0.002454
GO:0032101 regulation of response to external stimulus 11.32% (6/53) 2.93 0.000132 0.002456
GO:0016880 acid-ammonia (or amide) ligase activity 3.77% (2/53) 6.86 0.000129 0.002485
GO:0016211 ammonia ligase activity 3.77% (2/53) 6.86 0.000129 0.002485
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway 9.43% (5/53) 3.38 0.000119 0.002613
GO:0002831 regulation of response to biotic stimulus 11.32% (6/53) 2.94 0.000125 0.002632
GO:0042128 nitrate assimilation 3.77% (2/53) 6.71 0.000161 0.00277
GO:0042126 nitrate metabolic process 3.77% (2/53) 6.71 0.000161 0.00277
GO:0050896 response to stimulus 43.4% (23/53) 1.06 0.000168 0.002798
GO:0031348 negative regulation of defense response 9.43% (5/53) 3.24 0.000185 0.002886
GO:0009723 response to ethylene 9.43% (5/53) 3.25 0.000182 0.002933
GO:0071941 nitrogen cycle metabolic process 3.77% (2/53) 6.57 0.000196 0.002959
GO:2001057 reactive nitrogen species metabolic process 3.77% (2/53) 6.33 0.000277 0.004059
GO:0009605 response to external stimulus 22.64% (12/53) 1.66 0.00029 0.004115
GO:0046394 carboxylic acid biosynthetic process 15.09% (8/53) 2.2 0.000318 0.004266
GO:0009617 response to bacterium 11.32% (6/53) 2.7 0.000312 0.004303
GO:0050832 defense response to fungus 9.43% (5/53) 3.05 0.000336 0.004382
GO:0048583 regulation of response to stimulus 13.21% (7/53) 2.37 0.000381 0.004845
GO:0010310 regulation of hydrogen peroxide metabolic process 7.55% (4/53) 3.49 0.000448 0.005554
GO:0009863 salicylic acid mediated signaling pathway 9.43% (5/53) 2.9 0.000543 0.006559
GO:0016053 organic acid biosynthetic process 15.09% (8/53) 2.06 0.000587 0.00691
GO:2000377 regulation of reactive oxygen species metabolic process 7.55% (4/53) 3.37 0.000612 0.007033
GO:0090150 establishment of protein localization to membrane 9.43% (5/53) 2.81 0.000733 0.007081
GO:0043903 regulation of biological process involved in symbiotic interaction 9.43% (5/53) 2.81 0.000733 0.007081
GO:0072657 protein localization to membrane 9.43% (5/53) 2.81 0.000733 0.007081
GO:0051668 localization within membrane 9.43% (5/53) 2.8 0.000751 0.007111
GO:0046189 phenol-containing compound biosynthetic process 7.55% (4/53) 3.26 0.000813 0.00727
GO:0009696 salicylic acid metabolic process 7.55% (4/53) 3.27 0.000785 0.007295
GO:0009697 salicylic acid biosynthetic process 7.55% (4/53) 3.33 0.000682 0.007323
GO:0080135 regulation of cellular response to stress 9.43% (5/53) 2.76 0.000835 0.007333
GO:0010363 regulation of plant-type hypersensitive response 9.43% (5/53) 2.81 0.000716 0.007354
GO:0005618 cell wall 11.32% (6/53) 2.44 0.00081 0.007385
GO:0048585 negative regulation of response to stimulus 9.43% (5/53) 2.83 0.000673 0.00739
GO:0000165 MAPK cascade 7.55% (4/53) 3.34 0.000658 0.007392
GO:0006612 protein targeting to membrane 9.43% (5/53) 2.82 0.000707 0.007423
GO:0030312 external encapsulating structure 11.32% (6/53) 2.42 0.000878 0.007571
GO:0043067 regulation of programmed cell death 9.43% (5/53) 2.72 0.000969 0.008209
GO:0018958 phenol-containing compound metabolic process 7.55% (4/53) 3.18 0.000992 0.008258
GO:0010941 regulation of cell death 9.43% (5/53) 2.69 0.001059 0.008523
GO:0009595 detection of biotic stimulus 5.66% (3/53) 3.91 0.001056 0.008643
GO:0042537 benzene-containing compound metabolic process 7.55% (4/53) 3.02 0.001492 0.011817
GO:0009703 nitrate reductase (NADH) activity 1.89% (1/53) 9.03 0.001916 0.013816
GO:0050311 sulfite reductase (ferredoxin) activity 1.89% (1/53) 9.03 0.001916 0.013816
GO:0016002 sulfite reductase activity 1.89% (1/53) 9.03 0.001916 0.013816
GO:0050463 nitrate reductase [NAD(P)H] activity 1.89% (1/53) 9.03 0.001916 0.013816
GO:0016673 oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor 1.89% (1/53) 9.03 0.001916 0.013816
GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor 1.89% (1/53) 9.03 0.001916 0.013816
GO:0009610 response to symbiotic fungus 3.77% (2/53) 4.82 0.002299 0.016331
GO:0009608 response to symbiont 3.77% (2/53) 4.78 0.002424 0.016489
GO:0009066 aspartate family amino acid metabolic process 5.66% (3/53) 3.49 0.002422 0.016714
GO:0043436 oxoacid metabolic process 18.87% (10/53) 1.5 0.002416 0.016913
GO:0000097 sulfur amino acid biosynthetic process 7.55% (4/53) 2.81 0.002555 0.01714
GO:0051606 detection of stimulus 5.66% (3/53) 3.44 0.002677 0.017714
GO:0044283 small molecule biosynthetic process 15.09% (8/53) 1.71 0.002751 0.017953
GO:0006082 organic acid metabolic process 18.87% (10/53) 1.46 0.002923 0.018822
GO:0097164 ammonium ion metabolic process 1.89% (1/53) 8.03 0.003829 0.021018
GO:0003962 cystathionine gamma-synthase activity 1.89% (1/53) 8.03 0.003829 0.021018
GO:0003879 ATP phosphoribosyltransferase activity 1.89% (1/53) 8.03 0.003829 0.021018
GO:0036474 cell death in response to hydrogen peroxide 1.89% (1/53) 8.03 0.003829 0.021018
GO:0008940 nitrate reductase activity 1.89% (1/53) 8.03 0.003829 0.021018
GO:0010421 hydrogen peroxide-mediated programmed cell death 1.89% (1/53) 8.03 0.003829 0.021018
GO:2001227 quercitrin binding 1.89% (1/53) 8.03 0.003829 0.021018
GO:0004071 aspartate-ammonia ligase activity 1.89% (1/53) 8.03 0.003829 0.021018
GO:2001147 camalexin binding 1.89% (1/53) 8.03 0.003829 0.021018
GO:0002215 defense response to nematode 1.89% (1/53) 8.03 0.003829 0.021018
GO:0097243 flavonoid binding 1.89% (1/53) 8.03 0.003829 0.021018
GO:0009611 response to wounding 7.55% (4/53) 2.67 0.003602 0.022891
GO:0000096 sulfur amino acid metabolic process 7.55% (4/53) 2.65 0.003761 0.023589
GO:0072330 monocarboxylic acid biosynthetic process 9.43% (5/53) 2.21 0.00441 0.023933
GO:0016879 ligase activity, forming carbon-nitrogen bonds 3.77% (2/53) 4.33 0.004494 0.024119
GO:1901617 organic hydroxy compound biosynthetic process 9.43% (5/53) 2.2 0.004611 0.024474
GO:0006529 asparagine biosynthetic process 1.89% (1/53) 7.44 0.005739 0.028872
GO:0019419 sulfate reduction 1.89% (1/53) 7.44 0.005739 0.028872
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 1.89% (1/53) 7.44 0.005739 0.028872
GO:1901607 alpha-amino acid biosynthetic process 7.55% (4/53) 2.49 0.005563 0.028889
GO:0005576 extracellular region 22.64% (12/53) 1.17 0.005538 0.029074
GO:0050794 regulation of cellular process 28.3% (15/53) 0.99 0.005907 0.029411
GO:0019344 cysteine biosynthetic process 5.66% (3/53) 2.93 0.007162 0.035297
GO:0006534 cysteine metabolic process 5.66% (3/53) 2.92 0.007355 0.035882
GO:0001887 selenium compound metabolic process 1.89% (1/53) 7.03 0.007644 0.036198
GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors 1.89% (1/53) 7.03 0.007644 0.036198
GO:0009070 serine family amino acid biosynthetic process 5.66% (3/53) 2.9 0.007551 0.036471
GO:0008652 cellular amino acid biosynthetic process 7.55% (4/53) 2.34 0.007934 0.037207
GO:0046209 nitric oxide metabolic process 1.89% (1/53) 6.71 0.009546 0.042694
GO:0006809 nitric oxide biosynthetic process 1.89% (1/53) 6.71 0.009546 0.042694
GO:0036473 cell death in response to oxidative stress 1.89% (1/53) 6.71 0.009546 0.042694
GO:0008061 chitin binding 1.89% (1/53) 6.71 0.009546 0.042694
GO:0097468 programmed cell death in response to reactive oxygen species 1.89% (1/53) 6.71 0.009546 0.042694
GO:0050789 regulation of biological process 30.19% (16/53) 0.85 0.010933 0.048445
GO:0010225 response to UV-C 1.89% (1/53) 6.44 0.011445 0.049801
GO:0009627 systemic acquired resistance 5.66% (3/53) 2.69 0.011364 0.049896
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_3 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_6 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_15 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_19 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_20 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_26 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_29 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_41 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_46 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_48 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_50 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_56 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_67 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_69 0.046 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_77 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_78 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_81 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_85 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_88 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_94 0.051 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_95 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_105 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_111 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_120 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_121 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_125 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_132 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_136 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_140 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_141 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_142 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_143 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_148 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_165 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_170 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_175 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_177 0.055 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_180 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_187 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_193 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_197 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_198 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_210 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_212 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_215 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_216 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_217 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_225 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_229 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_243 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_255 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_281 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_77 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_20 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_254 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_269 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_119 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms